Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2591 ATGAGAGATATTCTCCTTGCCAAAGTTCATAGTGCTGGTGTCGTTGATTATATCAGCTACACCACATCGAGGGTGAACATTCAACTGAAGAGTATTCGTATTGAGCTCGTTGATAACTATAAGATTGAAGTCCTTCTGATAAGTTTTAATGGCAGATTCAAGGACGTCGTCAAAGTCGTTGGTGAAGTTGTAAGCGGAAAGCTTCGAGCAACATCATTTTCATATGCTCCTACCCTCGCTTCCGGTGAAACCCTACTGAAGAACCTCATTCTCAAAGTGAAGGCTACTAGTAAGGTTTCGCTTCTCTTTCTGTCTAGTTTCCTGCATTGTTTAGCATCTGTTAGTGGGGGTTTTTTCTGTTCTGAGGAGGCTCTACTGATATGTGGAAAGTTTAGATACTCCAGAGTCTGCGTTGAGGTTGATTGTGAAGAGTTATATAGGTGCCTAATTGCAAGAACAATTAATGGAGTGGAGTGGCAGGGTGTGTCTACCCTGTCTGATGTTCTTTTGCTGGTTGCGAATAGGTCTGAGGTTTTGTTGACTCATTTCTTGTCTGCACTTTTTGCTACTGTCTGTGTGTTTCTCCACTCCATGCAAGGGAAAAAGATGAAGAAAGTTGTTCATACTGATGAAGCTGATGAGATGCCAGCTTTGCATTCACCAATTTCCGATTCGCCATACAATGCAGAGCCCAAACCGGCTGTCCCCATTAAGTATTCTGTTGTCAGTAGGCGTGGGTTTGGGACTTTGGGGAAACACATGCCAGTGCTTGCCAATCATTTCCAAGTTTCTGTTGGTGTTCCAGATGCTGTATTTTTCCAGTATAGTGTTTCTATTACTTCAGAAAAAGATAGAGCTGTCGAGAGCAAGGGCATTCGAAGAAAACTGATTGATAGGCTTTACCAAACCTACTCTTCTGAACTTGGTGGTAAAAGGTTTGCCTATGATGGAGGGAAAAATTTGTATGCAGTGGGTCCTCTGCGACATCAAAAGCTTGAGTTCACAGTAGTACTTGAGGAATCATTGGCAAAATGCAGTTATAGTAATCCTGGTGCTGATGGAAACCTTAGCGTGGAAAATAAAAGGTCAAAGCATTCTTTTAAGTCAACAACTTTCAATGTGAAGATAAATTTTGCTGCTGAAGTACCCCTACGGTCCATTGCATTTGCCCTGGAAGGAGTTGAGTCAGATTCTAATGCTCAGGATGCTTTGAGAGTGCTTGATACTATTCTGAGGCAGCAAGCAGCTAGCATGAGCTGTCTTTTGGTAAGGCAATCATTCTTTCATGATGACTCGAGGAATTTCACTGATGTTGGAGGTGGGGTAACAAGAGTTCAAGGTTTTCACTCCAGCTTTCATACTACACAGGGTGGATTGTTTCTCAATATGGATGTGTCCACAACAATGATCTTAACCCCTGGACCTGTAATTAATTTTCTCCTATCCAACCAGAATGTGAGGGAACCCCGTTATATTGACTGGGCAAAGGCCAAGAGAATGCTTAAAAATTTAAGGGTGCGTGCTTCTCATCGCAACCATGAATTTAAAATTATTGGCTTGAGTGAAAAACCATGTAATCAGCAACTTTTCAGTATGAAGGTGAAAAACAGTGAGGGCAGTAATGGAGTGGAGATGGTGGATATTACTGTTTATGAGTATTTTGCTAAACACTGTGGCATAGAACTGATTTCTGCATATCTTCCTTGCCTTGATGTGGGGAAGCCTAAACGGCCTGTCTATCTGCCAATGGAGCTTTGCTCACTCATCCCCCTTCAACGTTATACAAAGGCATTATCTCCAATGCAGAGAGCTTCTTTAGTTGAAAAATCACGGCAAAAGCCGCAAGATAGAATCAAAATCATAACAGATGCTATGGCACATCATAACTATGATGATGATCCTGTTCTTGCGGCATGTGGCATTTCTATCAAGAAGCAATTTACACAAGTTGAAGGTCGAGTTCTTGAGACTCCAAAATTGAAGGTTGGTAAGAATGATGAGTGCTTCCCTCGTAATGGACGGTGGAACTTTAATAACAAGACACTTCTACAACCAGCTCACATTGAACTCTGGGCTGTGGTCAACTTTTCAGCTCGTTGTGATACTAGTTACATTTCAAGGGAGCTTATCAAATGTGGAATGAACAAAGGAATTAAAATTGAACGCCCGTATACTTTAATTGAAGAAGATTCACAAATTAGAAGATCTACCCCTGTTGCAAGAGTTGAAAAGATGTTTGAGCTGCTATATGCTAAGCTTCTTGAAGAACCAGACTTCATTCTTTGTGTCTTGCCAGAGAGGAAAAATTGTGACATTTATGGACCTTGGAAGAAGAAATGTCTGACTGAAGTTGGTGTTATCACACAGTGCATTTCTCCTTTGAAGATCAACGATCAATACCTTACTAATGTACTTCTTAAAATCAATTCTAAGCTTGGCGGAATAAATTCTTTGTTGGCCATAGAGCATTCTGGGCATATTCCCCTACTAAATGATACTCCCACACTGATTTTAGGAATGGATGTCTCTCATGGTTCCCCTGGTCGATCAGACCTTCCATCAATAGCAGCTGTTGTTGGATCTAGATGCTGGCCCCTAATTTCAAGGTATAGAGCATCTGTTCGAACACAATCATCTAAGGCAGAGATGATTGATGCTCTATACAAGCCTTTGGAGGATGGGAAAGATGATGGCATGATCAGAGAACTACTTTTGGATTTCTATCATTCAAGTAATGGACGAAAACCAACTCAAATTATTGTCTTCAGGGATGGAGTTAGTGAATCGCAATTTAATCAGGTTTTGAACATTGAGCTGGACCAAATAATTAAGGCCTATCAACATCTTGGAGACGCTGATGCTCCCAAGTTCACAGTAATTGTGGCACAAAAGAATCACCATACAAAGTTGTTTCTTGCTAATGGTTCAGATAATGTCCCTCCTGGGACAGTTGTTGACACACAAATTGTGCATCCTCGGAATTATGATTTCTTCATGTGTTCACATGCAGGGAATCTTGGAACTCCTAGGCCAGCACATTACCATGTGTTACTAGATGAGATTGGTCTCTCAGTGGATGACTTGCAAAATTTAATCCATTCGCTGTCTTATGTGTACCAGAGGAGTACAGCTGCAACTTCAGTTGTGGCACCCATATCCTATGCCCACTTTGCCGCTGCTCAGATGAGTCAATTTTTGAAGTCTGATGATTCATCAGGGACACCCTCAATTTTGACCACTGAACTAGATGTTCCAATCCCAGAGCTTCCGAGGTTGCATCACAATGTTCAGAGTAGCATGTTCTTCTGTTGA 3312 0.4146 MRDILLAKVHSAGVVDYISYTTSRVNIQLKSIRIELVDNYKIEVLLISFNGRFKDVVKVVGEVVSGKLRATSFSYAPTLASGETLLKNLILKVKATSKVSLLFLSSFLHCLASVSGGFFCSEEALLICGKFRYSRVCVEVDCEELYRCLIARTINGVEWQGVSTLSDVLLLVANRSEVLLTHFLSALFATVCVFLHSMQGKKMKKVVHTDEADEMPALHSPISDSPYNAEPKPAVPIKYSVVSRRGFGTLGKHMPVLANHFQVSVGVPDAVFFQYSVSITSEKDRAVESKGIRRKLIDRLYQTYSSELGGKRFAYDGGKNLYAVGPLRHQKLEFTVVLEESLAKCSYSNPGADGNLSVENKRSKHSFKSTTFNVKINFAAEVPLRSIAFALEGVESDSNAQDALRVLDTILRQQAASMSCLLVRQSFFHDDSRNFTDVGGGVTRVQGFHSSFHTTQGGLFLNMDVSTTMILTPGPVINFLLSNQNVREPRYIDWAKAKRMLKNLRVRASHRNHEFKIIGLSEKPCNQQLFSMKVKNSEGSNGVEMVDITVYEYFAKHCGIELISAYLPCLDVGKPKRPVYLPMELCSLIPLQRYTKALSPMQRASLVEKSRQKPQDRIKIITDAMAHHNYDDDPVLAACGISIKKQFTQVEGRVLETPKLKVGKNDECFPRNGRWNFNNKTLLQPAHIELWAVVNFSARCDTSYISRELIKCGMNKGIKIERPYTLIEEDSQIRRSTPVARVEKMFELLYAKLLEEPDFILCVLPERKNCDIYGPWKKKCLTEVGVITQCISPLKINDQYLTNVLLKINSKLGGINSLLAIEHSGHIPLLNDTPTLILGMDVSHGSPGRSDLPSIAAVVGSRCWPLISRYRASVRTQSSKAEMIDALYKPLEDGKDDGMIRELLLDFYHSSNGRKPTQIIVFRDGVSESQFNQVLNIELDQIIKAYQHLGDADAPKFTVIVAQKNHHTKLFLANGSDNVPPGTVVDTQIVHPRNYDFFMCSHAGNLGTPRPAHYHVLLDEIGLSVDDLQNLIHSLSYVYQRSTAATSVVAPISYAHFAAAQMSQFLKSDDSSGTPSILTTELDVPIPELPRLHHNVQSSMFFC 1103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2591 1103 Pfam Argonaute linker 2 domain 616 661 IPR032472 -
Alju08g2591 1103 FunFam Protein argonaute 7 468 594 - -
Alju08g2591 1103 Pfam Piwi domain 759 1067 IPR003165 GO:0003676
Alju08g2591 1103 ProSiteProfiles PAZ domain profile. 498 590 IPR003100 GO:0005515
Alju08g2591 1103 ProSiteProfiles Piwi domain profile. 759 1067 IPR003165 GO:0003676
Alju08g2591 1103 CDD PAZ_argonaute_like 473 589 - -
Alju08g2591 1103 FunFam Protein argonaute 3 827 1103 - -
Alju08g2591 1103 SUPERFAMILY PAZ domain 468 630 IPR036085 GO:0005515
Alju08g2591 1103 Pfam Argonaute linker 1 domain 423 470 IPR014811 -
Alju08g2591 1103 SUPERFAMILY Ribonuclease H-like 755 1065 IPR012337 -
Alju08g2591 1103 SMART DUF1785_2 421 473 IPR014811 -
Alju08g2591 1103 Gene3D - 826 1103 IPR036397 GO:0003676
Alju08g2591 1103 Pfam PAZ domain 478 606 IPR003100 GO:0005515
Alju08g2591 1103 Gene3D - 654 820 - -
Alju08g2591 1103 Pfam N-terminal domain of argonaute 253 411 IPR032474 -
Alju08g2591 1103 CDD Piwi_ago-like 634 1061 IPR045246 -
Alju08g2591 1103 Gene3D paz domain 467 594 - -
Alju08g2591 1103 SMART Piwi_a_2 759 1067 IPR003165 GO:0003676
Alju08g2591 1103 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 232 1069 - -
Alju08g2591 1103 SMART PAZ_2_a_3 468 612 IPR003100 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2591 Alju-ChrAlju08 39262757 39274000 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2591 244 1103 Eukaryotic Initiation Factors Gene Family AT5G43810 37.181 1.77e-163 508