Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2540 ATGTGTTTCCGCGCTACTTCCTTGCTTCTATTTCTTTGCTTCCCAACACTTTCCCTTTCACGCAGATTTCGTCTTATCAGGTTGAAATCGAACAAATCATCCTTCAGCTTCCAAATTATTGCAATGGCATTTAATGCACACAGAGCTGCGTACCTTTCAAGCTCTTCTGGTTCAGTTAAGAGATGGAAGTATCATGTATTCTTAAGCTTCCGAGGAGAAGACACTCGTAAAAATTTTACAGATCATTTGTATCGTGCTTTGCAACGCAAGGGAATCATAGCTTTCAGGGATGATGAAGAACTAGAGAGGGGACATGTTATTAAACCAAGTTTGGTTCAAGCAATTGAAGAATCACTTACTGCTATTGTTGTTCTATCTGCAAATTTTGCTTCTTCAGCTTGGTGCTTGGACGAACTCTTGAAGATTCTTCATTCTCAGAAACAAAGAGGCTTATTGGTGTTTCCAATCTTTTATGGGGTAGATCCGTCTGATATTCGACATCAAACAGGAAATATTGGAAAAGCATTTGAAAAAGTTGAAGAAAAATTCACACAAGACAAAATGAGGGTGCAAAGATGGAGGCATGCTTTAGAAGAAGTTGCCAACTTATCTGGCTGGCACTCTGACAATTGGCATGAAGCAGAACTCATTGAAACTGTAGTAGAAGAAGTGTGGTCAAAAATATATGATGAACTTCCATTTGACTCAGAGAGATTAGTTGGAATTGAATCAAAACTAGCAGAATTAGATTCATTCATAGCAAATGGAATGGGTGGAGTTCAATTTGTAGGAATATGGGGCACAGGAGGCTTGGGTAAAACTACACTTGCTAGAGCTTTTTATGAGAGAATGCACAAATGCTTTGATGGTCATTGCTTTCTTCATAATGTTAGAGAAGTATCGAAAACAGATGGTTTGGTTTCCTTGCAAAGAAAAGTTCTTTCTTCTCTACATAAAAGAAGCATGGATGTGAGTGACTATTATGAAGGAAGGAAGTTGATAAAAAACATGTCATGCAATAAAAAAGTTCTACTTGTCGTCGATGATGTGAGTGAAATAAGCCAACTTGAGAACTTGGCTGGGAAACAAGGATGGTTTGGTGAAGGGAGTATAATATTAGTAACAACTAGAGATAAACATGTGTTATCAGCATATGATGTATCTGATCAATATGACATGAAATTCTTGAGTGATGGTGAGTCTCTTGAACTTTTCCATCAAAATGCTTTCAAAGGAAATAAGCCAAACAAAGATTTCTTGGAACTTTCTAAAACTGTGATTCAATATGCTAAAGGTCTTCCTCTGGTACTCAAAGTGCTAGGTTCATTTCTTTGTGGAAGAAGTATATTAGAATGGAAAGATGCAATAGCTAAGTTCAGGAAAGTTCTTCCGAATGATGTCTTGAACATACTTCAAGTGAGTTTTGATGGATTAGATGATGATGAGAAGAATATTTTTTTGGATATTGCTTGCTTTTTTAATGGGAAGAAGAAAGATTATGTCATACAAATGTTAAAAAATCTGGATCTTCACCCAATAGTTGGAATAAAAGTTCTTATTGATAAATCATTGGTAATTGATGATGAAGGGATTTTGTGGGTGCATGACATACTTCAAAAAATGGGTCAGAATATTGTTTTCCAGGAATCACCCGATGATGTTGGCAAGCGTAGTAGGATATGGTCCTTGGAAGATGCTAATTCTGTGTTAGAAGGAGAAAAGGGGTCAGAAAAAATCCGAGGTATACTATTAAGATTAGACCAAAAGTGTATGTCAAAATGGGACCCTAAAACCTTCTCAAACATGAGTAATCTTAAATTACTTATCATAACAAGTTGTTCACGTGGCCCTCATTGTTTTTTGAATCTTCGTTATGGACTCGAATGCTTTTCAAGTGCATTAAAAATCCTACAATGGAACGGGTTTTGTTTAGATGATCTGCCAAGTCATGGACATCAAGGATCACAGGCTTTTGGAAGGCTTAAATTTATGGATTTAAGCTATTCAAGATATCTAATCAAGACGCCAGATTTTGATGAAATTCCTGATCTTCAAAATCTCATTCTTGAAGGTTGTATAAACCTTGTTGAAGTACATCCATCTCTTGGGTACCATCAGAAACTTGTCATGGTCAATTTGAAGGGTTGTAAGAGTATCAAAACTCTTCCAAAAAAGTTTGAGATGAAATGCCTGGAGACTCTTGTACTATCAGGTTGCTTCAAAATTAGACGGCTTCCAGAATTTGGGCAAAGCATGAAATGTCTAACCAAACTTGATGTAGAGGAGACTGGCATCACAAAACTACCTCAATCACTTGTCAATTTGTGTCAGCTTGTCGTTTTAAATCTAAGGAATTGCAAAAATCTGGTATGCCTTCCAAATCTTGATGAAATCCCCAATCTTCAAAATCTTATTCTTGAAGGTTGTATAAACCTTGTTGAAGTACATCCATCTTTTGGGCACCATCAGAACCTTGTCATGGTCAATTTGAAGGGTTGTAGGAGTATCAGAACTGTTCCAAGTAAGTTTGAGATGAAATGCCTAGAGACTCTTGTACTCTCAGGTTGCTTCAAAATTAGACAACTTCCAGAATTTGGGCAAAGCATGAAATGTCTAACCAAGCTTGATGTAGAAGAGACTGACATCACAAAACTACCTCAATCACTTGTCAATTTGTGTCAGCTTGTCGTTTTAAATCTAAGGAAGTGCAAAAATCTGGTATGCCTTCCAAATGTGATTTATTGTTTGAAGTCTTTAAAAATTCTCAATATTTCTAGTTGCCCAAAACTCTCGAGACTGCCAAAGAATCTGAACGAAAATGTAGCTTTGGAGGAGCTTGATGCTAGTGGAACTGCTATAAATGAAGTGCCTTCATCAATACTTCATTTGAAGAATTTAAGATCTCTATCTTTTAGTAGATGCAGTGGGCAAGCACAATCATCCTCCCTAAATTTCTCTTCTTTTTTGAGCAGATTCTTGAGGCTTACAAGGCCTTCAATATCCACTGGGTTATTGCTACCCCCTTCTTTATCTTGTTTATCAAATTTGTGGAAGTTAGATCTAAGTTATTGCAATCTCTCTGATGAGTCACTTCCAAATGATATTAATGCTTTATCATCATTGGAGACTCTTGATCTGAGTGGAAACAATTTTGTTAACCTACCTGTTGCCTTCATCTCAAATCTTTTAAAGCTTTGCTTACTTAAGTTCAATCAATGCCCAAGGCTTCAGTCGTTTCCACGACTTCCATCAGGCGATGTACGGGCAATGGATTGTCCTTCAATGAAACATGTATTGGATTCCCAACAGCTGTGGAAGATATTTGAAAGATTTGAATATCAGGAGGACTTGCTGTCAAGAAGGCCGTTTTTTATGAATATCGGAGGAAGTGAAGTGCCAGCATGGTTTCACAATCAAAATTGCTTTTGTGATGATGCTTTGGATGAACAGCCAAATGTGTCATTTATAACAGACATACAAGATCATCACCATTCAAGTAAACAGTTGGGAATAGCTGTATGCTTAGCTATAGAAGGTCATTATGGTGCGTCTGCTTCTTATGATGAAGATTATCGAGGTTCTCATGTGTTCTGGAGTTGTAGAAATGTTGGAGATGAAGTCCCAGATCTATATATAGGCCACATTATTAATAAACAACATAATGATCGAACCCAACTTTTTTTATTCTTTTTCTCATGTGTCGATAAGAAAAGACCTCAAATTAGCTTTCATATCGACAACCATAGAATGGAAGCAAATTTTGAAATAAAGAAGTGTGGATGGCGTGTATTGTGTAAAGAAGATATTGAATCATGGCGAAGAACAAGGGGTGAAGGATGTAGCAGCAGCAATAAATGTTCAGACAACTACCATAATCATAATGAATTGGGGGCAACAGAAGCAACACGTGACAGCTTAAGCAATTCTCAATCCATTAATGGCAGTGAAGAAGAAGATGGACAGTCTAATGTTGATGTGGACATGCAAATGCCTCTGACAAAACGCAGGAAACTACGATGA 4020 0.3701 MCFRATSLLLFLCFPTLSLSRRFRLIRLKSNKSSFSFQIIAMAFNAHRAAYLSSSSGSVKRWKYHVFLSFRGEDTRKNFTDHLYRALQRKGIIAFRDDEELERGHVIKPSLVQAIEESLTAIVVLSANFASSAWCLDELLKILHSQKQRGLLVFPIFYGVDPSDIRHQTGNIGKAFEKVEEKFTQDKMRVQRWRHALEEVANLSGWHSDNWHEAELIETVVEEVWSKIYDELPFDSERLVGIESKLAELDSFIANGMGGVQFVGIWGTGGLGKTTLARAFYERMHKCFDGHCFLHNVREVSKTDGLVSLQRKVLSSLHKRSMDVSDYYEGRKLIKNMSCNKKVLLVVDDVSEISQLENLAGKQGWFGEGSIILVTTRDKHVLSAYDVSDQYDMKFLSDGESLELFHQNAFKGNKPNKDFLELSKTVIQYAKGLPLVLKVLGSFLCGRSILEWKDAIAKFRKVLPNDVLNILQVSFDGLDDDEKNIFLDIACFFNGKKKDYVIQMLKNLDLHPIVGIKVLIDKSLVIDDEGILWVHDILQKMGQNIVFQESPDDVGKRSRIWSLEDANSVLEGEKGSEKIRGILLRLDQKCMSKWDPKTFSNMSNLKLLIITSCSRGPHCFLNLRYGLECFSSALKILQWNGFCLDDLPSHGHQGSQAFGRLKFMDLSYSRYLIKTPDFDEIPDLQNLILEGCINLVEVHPSLGYHQKLVMVNLKGCKSIKTLPKKFEMKCLETLVLSGCFKIRRLPEFGQSMKCLTKLDVEETGITKLPQSLVNLCQLVVLNLRNCKNLVCLPNLDEIPNLQNLILEGCINLVEVHPSFGHHQNLVMVNLKGCRSIRTVPSKFEMKCLETLVLSGCFKIRQLPEFGQSMKCLTKLDVEETDITKLPQSLVNLCQLVVLNLRKCKNLVCLPNVIYCLKSLKILNISSCPKLSRLPKNLNENVALEELDASGTAINEVPSSILHLKNLRSLSFSRCSGQAQSSSLNFSSFLSRFLRLTRPSISTGLLLPPSLSCLSNLWKLDLSYCNLSDESLPNDINALSSLETLDLSGNNFVNLPVAFISNLLKLCLLKFNQCPRLQSFPRLPSGDVRAMDCPSMKHVLDSQQLWKIFERFEYQEDLLSRRPFFMNIGGSEVPAWFHNQNCFCDDALDEQPNVSFITDIQDHHHSSKQLGIAVCLAIEGHYGASASYDEDYRGSHVFWSCRNVGDEVPDLYIGHIINKQHNDRTQLFLFFFSCVDKKRPQISFHIDNHRMEANFEIKKCGWRVLCKEDIESWRRTRGEGCSSSNKCSDNYHNHNELGATEATRDSLSNSQSINGSEEEDGQSNVDVDMQMPLTKRRKLR 1339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2540 1339 SUPERFAMILY L domain-like 818 1082 - -
Alju08g2540 1339 Pfam TIR domain 63 230 IPR000157 GO:0007165
Alju08g2540 1339 Pfam NB-ARC domain 257 461 IPR002182 GO:0043531
Alju08g2540 1339 PRINTS Disease resistance protein signature 262 277 - -
Alju08g2540 1339 PRINTS Disease resistance protein signature 430 444 - -
Alju08g2540 1339 PRINTS Disease resistance protein signature 337 351 - -
Alju08g2540 1339 PRINTS Disease resistance protein signature 1036 1052 - -
Alju08g2540 1339 SMART LRR_typ_2 752 775 IPR003591 -
Alju08g2540 1339 SMART LRR_typ_2 869 892 IPR003591 -
Alju08g2540 1339 SMART LRR_typ_2 1013 1037 IPR003591 -
Alju08g2540 1339 SMART LRR_typ_2 916 940 IPR003591 -
Alju08g2540 1339 SMART LRR_typ_2 1038 1061 IPR003591 -
Alju08g2540 1339 SUPERFAMILY L domain-like 599 905 - -
Alju08g2540 1339 SUPERFAMILY Toll/Interleukin receptor TIR domain 53 206 IPR035897 -
Alju08g2540 1339 SMART till_3 63 203 IPR000157 GO:0007165
Alju08g2540 1339 MobiDBLite consensus disorder prediction 1298 1339 - -
Alju08g2540 1339 FunFam Disease resistance protein (TIR-NBS-LRR class) 60 230 - -
Alju08g2540 1339 Gene3D Ribonuclease Inhibitor 575 727 IPR032675 -
Alju08g2540 1339 MobiDBLite consensus disorder prediction 1298 1319 - -
Alju08g2540 1339 Gene3D - 395 479 IPR042197 -
Alju08g2540 1339 ProSiteProfiles TIR domain profile. 62 232 IPR000157 GO:0007165
Alju08g2540 1339 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 64 746 IPR044974 GO:0006952
Alju08g2540 1339 Gene3D Ribonuclease Inhibitor 869 985 IPR032675 -
Alju08g2540 1339 Gene3D - 60 228 IPR035897 -
Alju08g2540 1339 Gene3D - 229 391 IPR027417 -
Alju08g2540 1339 SUPERFAMILY "Winged helix" DNA-binding domain 466 570 IPR036390 -
Alju08g2540 1339 Gene3D Ribonuclease Inhibitor 986 1098 IPR032675 -
Alju08g2540 1339 Gene3D Ribonuclease Inhibitor 728 868 IPR032675 -
Alju08g2540 1339 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 232 489 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2540 Alju-ChrAlju08 36918894 36927424 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2540 240 889 WRKY Transcription Factor Family AT5G45050 30.849 2.49e-80 288