Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2509 ATGGCTACCAGCCGGAGTGTGTTCGGTACTTGCTGAGAGGCCATGAATTGTGCTGATTATCTTGCGAGAAAAGCCCATCATTTGGCCAGCAACATTGAGCTCCTGCGACGCCCACCCGCTGGAATTATGGATCTATCATATCTAGGAGACAAGACATATCTTGACTCTCGTCTTGCTTATCCAGGTACTTTTCATGTTCATTCACGTTCATCTCTCATTGAATTCATTGCCTTCTCATCATCAAGCAGCCTCGATCATCCGTTTAATGATCAAGCTTTTGAAATATCATCAAGTTCATCTAGTGTCTGTGTTTTACAGATGGAAGGCATTGTTATCGGTATTGGAGAAATGGTTCTAAAATGCCTTGCGGGTCCAATTTTAGCTCGTGCTCGTTATTTGTTTTGCTTTAAGCAATTCATTAGAGAGCTTAAGGAAGCAAAAGATGAGCTGAAGACAAGGCTAGATGAAGTGAAGGAACGTAAAGAACAAGCTGCCCGAAAAAGTGAGGAAATAACGCTTCCTGTGAAGAATTGGTTCAATGATGTGGAGAAAATTCTAGAAGATGTTCATGAGTTGCAACGAAAGGTTGAAGGGGAAGGAAAGAGTTGTTTCAACGTGTCACATAGGTATTCCTTGGCAAAACAAATGGATAAAAAGGCAAAGTGGATGATGCAACTCAAAAAGGATTCCCATTCCCACTTTGACAAAGACCCTTTTTCTCATCTCACCCAAATTCCTGGCATCAGTTACTACTCTTCCAAAGACTTTGTGGATTTCAACTCAAGGAAGTCTACTTCTAATCATCTTTTGGAGGCAATAAAAGATGGAAAGAACAAGATGATTGGACTCTATGGCATGGGCAGCTCAGGTAAAACAACTTTGGCAAAGGAAGTGGGAAAGAAAGTGAATGATTTGAAGCTTTTTGAGAAGGTTGTTCTCGTGGTTGTTTCGAAACTTCCAAATGTTGCAAAACTTCAGCAGGAACTAGCAGAGCAAATAGGCTTAAAATTTCAAGATGAAACTCAACCTGCAAGGGCAAGAAGGCTATCAGAAAGATTGAAAAATGAGAAGATACTTATAATCTTGGATGATGTGTGGGAGTCTCTAAGTCTTGAAGATATTGGCATTCCACTTGTTGAAGGTTGTCAAATCTTGTTAACCACTCGCCTTAGGAACGTATGTGTCTCTATGGATTGTAAGACTATCATTGAACTGCCTTTGATAACTAAGGAGGAAGCATGGGAATTATTCAAGAAGCATGCAAATCTATACAATGATCCTTCAAACAAGTTTGATGATGTGGGAAGGAAGATCGTCGATGAGTGCAAGGAACTTCCAATTGCAATTGTTGTGGTGGGAAGCTCTTTAAAGGGAAAACCTATTAGAGAGTGGAAGTCAGCACTATGGAGACTCAAACACTCCCTACCATTGAATGTTGAACAGGGTTTAAAAAGCCCTTATGCATGTCTTGAATTGAGTTATGATAATTTGCCAAGTTCATCAGCCAAATCGCTCTTTTTATTATGCTCTGTGTTCCCTGAAGATCATGAAATCCATAAAGAGGATTTAATTCGGTTTGGCAAGAGGACACTTGAGCTAGAGGAAAGTATCAACACAATGGAAGATGCGAGGAGAGAGATTTTAGTGTCTCTTAACATCTTGTTGGATTCTTGTTTGTTGATGAGTATCGATAAGCAAGCATGTGTGAAAATGCATGACTTAGTTCGAGATGTAGCTTTGTGGATTTCAAAGAAGCAACATCAAGCAATTCTTGTGGATAGCCATGTAGTTTCAAACATGTTGGTTAGCAACCGCCAAAGTTTGAAAGATACAAAAACATTATCATTGTGGAACCTGGATGAGAATTTCAAGCTCTCTAACCAATTGCATTGCCCGACACTTGACATTCTACTGCTTCAACCTCATGGGCTCATTGAAGATTTTGCAGGGATAAATGCACTCAAAGTCTTGGCCCTCATAACATATAGCTTTAAATGGAGCTTTTTGTGGGATGCCACACTTGATTGCTCACTCCCGCGATCAATTGTGTCATTAACGAATCTTCACACCTTATGTCTTAGAGGAAAAAGATTGGGAGACATCTCTTTTTTGGGTGAACTCAAAGGATTGGAGGTTCTTGACTTGCGTGGCTCTCTATTCAATGAATTACCCGCTGAAATTGTGGACATGAAAATGCTGAAACTTTTGGATGTGTTTGGTTGTGAAATTGAGAAAAGCTATATAGAAGTAATTGGAAGATGTGAGCAACTTGAAGAATTATACCTCTCGGATAGCAAATCTACCATCCCAGAAAATTTCTGTCTTCCAAGGTTGAAGAGGTATGTTATCTGGGAATGCCATATTTTTTATGATTTTCATTCGGAATATTATTTTCCAGACTATATGGATAGTTTGGATGGTGGTAATGAAGAAATGAGAGCTTTATGGATACAAGGCTTCAAAATCTCTACTTTGAATTTGTCAATGAAAAATCTCATTCATAGAGCAAACTTCCTTTGTTTAGATGATTGTAGGTGGGATCATAAACATATAAATTTATTTGAGATAAAGCACTTATTGGTTTATCGTTGTCAAGAGAAAAGATTCATCATTGATAACCTTGATGTTGACATTCTTCAAACACAGCAAGTATTCTCGAACCTGATTACTTTGAGATTGGTTGATATGAATAATCTTGAACAAGTTTTCAAAGATTCATGTATTAGCTACTCTCTCCCCATGTTACAAGAGCTGTTCATACTAAATTGTCCCCAATTGAGAACTTACATCTTCACTCACGCCATGATTACAAAAACGCCAAAGCTGAGGAGACTTGAGATTGATGGTTGCAAAAAAGTGAAATGGCTATTCTCTTATTCTCTTGCTTCTCATTGTCCTTCACTGGAGGAAATATTGATAAACGAGTGTTCTGAATTCGAGAGGCTCATTGATGAAGAAACTGCGCATGGGGACCCACTGCTTAATGATATGCAGAATTATCCATATCAACCCTTCATCCTTTTCCCCAAACTGAAGGAGATTACCATAGCGGATTGCAACAAATCCACAACACAAACATGA 3081 0.3885 MATSRSVFGTCXEAMNCADYLARKAHHLASNIELLRRPPAGIMDLSYLGDKTYLDSRLAYPGTFHVHSRSSLIEFIAFSSSSSLDHPFNDQAFEISSSSSSVCVLQMEGIVIGIGEMVLKCLAGPILARARYLFCFKQFIRELKEAKDELKTRLDEVKERKEQAARKSEEITLPVKNWFNDVEKILEDVHELQRKVEGEGKSCFNVSHRYSLAKQMDKKAKWMMQLKKDSHSHFDKDPFSHLTQIPGISYYSSKDFVDFNSRKSTSNHLLEAIKDGKNKMIGLYGMGSSGKTTLAKEVGKKVNDLKLFEKVVLVVVSKLPNVAKLQQELAEQIGLKFQDETQPARARRLSERLKNEKILIILDDVWESLSLEDIGIPLVEGCQILLTTRLRNVCVSMDCKTIIELPLITKEEAWELFKKHANLYNDPSNKFDDVGRKIVDECKELPIAIVVVGSSLKGKPIREWKSALWRLKHSLPLNVEQGLKSPYACLELSYDNLPSSSAKSLFLLCSVFPEDHEIHKEDLIRFGKRTLELEESINTMEDARREILVSLNILLDSCLLMSIDKQACVKMHDLVRDVALWISKKQHQAILVDSHVVSNMLVSNRQSLKDTKTLSLWNLDENFKLSNQLHCPTLDILLLQPHGLIEDFAGINALKVLALITYSFKWSFLWDATLDCSLPRSIVSLTNLHTLCLRGKRLGDISFLGELKGLEVLDLRGSLFNELPAEIVDMKMLKLLDVFGCEIEKSYIEVIGRCEQLEELYLSDSKSTIPENFCLPRLKRYVIWECHIFYDFHSEYYFPDYMDSLDGGNEEMRALWIQGFKISTLNLSMKNLIHRANFLCLDDCRWDHKHINLFEIKHLLVYRCQEKRFIIDNLDVDILQTQQVFSNLITLRLVDMNNLEQVFKDSCISYSLPMLQELFILNCPQLRTYIFTHAMITKTPKLRRLEIDGCKKVKWLFSYSLASHCPSLEEILINECSEFERLIDEETAHGDPLLNDMQNYPYQPFILFPKLKEITIADCNKSTTQT 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2509 1026 Gene3D - 408 493 IPR042197 -
Alju08g2509 1026 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 135 1021 - -
Alju08g2509 1026 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 252 509 IPR027417 -
Alju08g2509 1026 Gene3D Ribonuclease Inhibitor 663 868 IPR032675 -
Alju08g2509 1026 FunFam Probable disease resistance protein At1g61300 251 401 - -
Alju08g2509 1026 Coils Coil 175 195 - -
Alju08g2509 1026 PRINTS Disease resistance protein signature 280 295 - -
Alju08g2509 1026 PRINTS Disease resistance protein signature 442 456 - -
Alju08g2509 1026 PRINTS Disease resistance protein signature 705 721 - -
Alju08g2509 1026 PRINTS Disease resistance protein signature 352 366 - -
Alju08g2509 1026 Gene3D - 251 403 IPR027417 -
Alju08g2509 1026 SMART AAA_5 277 407 IPR003593 GO:0016887
Alju08g2509 1026 Pfam NB-ARC domain 267 496 IPR002182 GO:0043531
Alju08g2509 1026 Coils Coil 136 167 - -
Alju08g2509 1026 Gene3D - 494 580 IPR036388 -
Alju08g2509 1026 Gene3D Ribonuclease Inhibitor 931 1025 IPR032675 -
Alju08g2509 1026 SUPERFAMILY L domain-like 570 1019 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2509 Alju-ChrAlju08 35519137 35534349 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2509 279 586 WRKY Transcription Factor Family AT5G45050 24.051 3.40e-08 55.8