Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2460 ATGACCTCATTTGTTGGTTCTTATGGCTATGCTGCTCCAGAAATTGCTTTTACAATGCAACCAAATGAGAAATGTGATGTTTATAGTTTTGGTGTTCTCACATTAGAAATTTTAATGGGAAGACATCCGGGAGAATTCATTTATTCTTTGACAGAGATTCAAACATCCTATGATTTGCCATTAAAGGATGTGTTGGATAAGCGACTTCCTCAACCCTCAACCCAAGTTGTTAAGGAAGTAATGTTGATTGCAAAAATTGCACTCGCGTGCTTGAATGAAAATCCTCAGTACCGGCCGACCATGGAACAAGTATCTCTGAAACTTTTTAAGCCTAAACCTTATTCAGTGAATCAATTTGACAACATCACACTTGGACAACTCATGAAAGCTTAA 393 0.374 MTSFVGSYGYAAPEIAFTMQPNEKCDVYSFGVLTLEILMGRHPGEFIYSLTEIQTSYDLPLKDVLDKRLPQPSTQVVKEVMLIAKIALACLNENPQYRPTMEQVSLKLFKPKPYSVNQFDNITLGQLMKA 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2460 130 Pfam Protein tyrosine and serine/threonine kinase 9 107 IPR001245 GO:0004672|GO:0006468
Alju08g2460 130 Gene3D Transferase(Phosphotransferase) domain 1 1 110 - -
Alju08g2460 130 PANTHER LEUCINE RICH REPEAT KINASE 2 1 112 - -
Alju08g2460 130 ProSiteProfiles Protein kinase domain profile. 1 115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g2460 130 SUPERFAMILY Protein kinase-like (PK-like) 1 110 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2460 Alju-ChrAlju08 33488335 33488835 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2460 1 104 Receptor kinase-like Gene Family AT5G65700 42.857 5.22e-18 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Alju08g2460 PK_Tyr_Ser-Thr 7.5e-10 CL0016