Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2447 ATGCAACCCAAAAGCAATAATGCCTCAGTATTAGCAGTGTTCTTCCTAATTCTATTGTTAGAAACAACTTTTCTCATCAACAACGTAGAATCCAAGTATCTCAAAGGATGTCCTTTAGCTTTAGCATCCTACTACGCTCAAAACACCACTCTAGAGGATATAACTCAGCTTATTAGATCAGATCTTGTGTCAGATTCTGAAGTTGTTTCCAAATACAACGAAAGATCAATAGTATCCAACAATAATGGAATCTACATTCAATCCTTCACTAGAATCAACATTCCTTTCCCTTGTGATTGCATCAATAATGGGGATTTTCTGGGTCATGTGTTCGAGTACACAATATCAAAAGGAGACACATATGATTCCATTGCTACTAAAACGTATTCTTCGTTGACTACAGCGGATTCACTGAGAAGATTCAATAACTATAGTGATCCAAATCAGCTTCCTCTCAATGAAAAGCTTAATGTCACAGTGAATTGTTCTTGTGGGAACAGACAGATTTCTGAGGATTATGGTTTGTTTATTACCTATCCACTTGGGTTTGAAGATAGCTTGGAATCCATTGTGAACCAGACTGGTATTGATGCAACGTTGCTTCAGAGTTATAATCCTGGTGTGAATTTCAGCCACCAGGGTGGAGTGGTTTTTATTCCAGGAAGAGATCAGAATGGAAATTACCTGCCCCTGGACCCTAGGTCAAGAGGTCTAAGTGGGGTTACTATTGCTGGCATATGTGTTGGAGCGACATTTGTGTTTCTATCATTAGCAGCTTATGTATTTGTTAGACTTTTCCGAAGAAAAAAGACCGCCAAAGTGGCATTGTTCACAGAAAATTCTACAGAGCTTCCAAATCAAGACGGAGCTAGTGGCGCTGCTAGTACTGCTGATCTTAGGGGCATCATGGTTCGAAAATCCATGGAGTTTTCGTATCAAGAAATAGCCAAAGCTACCAATAACTTCAGTTCCGATAACAAGATTGGTCAAGGAGGTTTTGGAGTAGTATATTATGCCGAGTTAAGAGGCCAGAAAACTGCAATCAAGAAGATGGATATAAAAGCATCACAAGGGTTTCTCGCTGAGTTGAAGGTTTTAACACAAGTTCACCATTTGAATCTGGTGCGGTTGATAGGATATTGTGTGGAGGGATCGCTTTTCCTTGTTTATGAATACGTTAACAATGGAGACTTAAGCCATCATTTGCGTTCCTCAGGGTTAGATCCATTGCCATGGGAGACAAGGGTGCAAATTGCTGTGGATTCGGCAAGAGGTCTTGAATATATTCATGAACATACAGTGCCTCTATATATCCATCGTGATGTGAAGTCTTTGAACATATTAATCGACAAGAAATTCCACGCAAAGGTGGCAGATTTTGGATTAAGCAAACTCATTGAAGTTGGAAATGCCTCGCTTAACACACGTCGTCTTGTGGGAACATTTGGATATATGTCTCCAGAGTATGCTCAATATGGAATAACATCTCCAAAAATTGATGTATATGCTTTTGGAGTGGTACTTTATGAACTCATATCTGCTAAAAATGCTGTCCTCAAGACTACTAATGGTGAAGTTGTTGCTGAATCAAAAGGCCTTGTAGCTCTGTTTGAGAAATGTCTTCGAAGGCCAGATGCTGTTGAAGATCTTCGCAACCTTGTGGATCCTAGACTTGGACAAAACTACCCCATTGATTCAGTTTATAAGATGGCCCAACTTGGTAGAGCTTGTACACAAGATGATGCACAGCTACGTCCCACAATGAGATCTATTGTTGTAGCTCTTATGACACTTTCATCACCTTCTCCGTATGAAGATTGTGACGTTGTTGGCTCTGCCTTCTCTCATCATCAAACTATCATAAATCCACTCTCTGGAAGATAA 1884 0.3992 MQPKSNNASVLAVFFLILLLETTFLINNVESKYLKGCPLALASYYAQNTTLEDITQLIRSDLVSDSEVVSKYNERSIVSNNNGIYIQSFTRINIPFPCDCINNGDFLGHVFEYTISKGDTYDSIATKTYSSLTTADSLRRFNNYSDPNQLPLNEKLNVTVNCSCGNRQISEDYGLFITYPLGFEDSLESIVNQTGIDATLLQSYNPGVNFSHQGGVVFIPGRDQNGNYLPLDPRSRGLSGVTIAGICVGATFVFLSLAAYVFVRLFRRKKTAKVALFTENSTELPNQDGASGAASTADLRGIMVRKSMEFSYQEIAKATNNFSSDNKIGQGGFGVVYYAELRGQKTAIKKMDIKASQGFLAELKVLTQVHHLNLVRLIGYCVEGSLFLVYEYVNNGDLSHHLRSSGLDPLPWETRVQIAVDSARGLEYIHEHTVPLYIHRDVKSLNILIDKKFHAKVADFGLSKLIEVGNASLNTRRLVGTFGYMSPEYAQYGITSPKIDVYAFGVVLYELISAKNAVLKTTNGEVVAESKGLVALFEKCLRRPDAVEDLRNLVDPRLGQNYPIDSVYKMAQLGRACTQDDAQLRPTMRSIVVALMTLSSPSPYEDCDVVGSAFSHHQTIINPLSGR 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2447 627 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 19 609 IPR044812 GO:0019199|GO:0045087
Alju08g2447 627 ProSitePatterns Protein kinases ATP-binding region signature. 328 350 IPR017441 GO:0005524
Alju08g2447 627 FunFam LysM receptor kinase 2 301 392 - -
Alju08g2447 627 ProSiteProfiles LysM domain profile. 111 158 IPR018392 -
Alju08g2447 627 CDD LysM 113 158 IPR018392 -
Alju08g2447 627 SMART serkin_6 322 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g2447 627 Pfam Protein tyrosine and serine/threonine kinase 325 592 IPR001245 GO:0004672|GO:0006468
Alju08g2447 627 ProSiteProfiles Protein kinase domain profile. 322 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g2447 627 SUPERFAMILY Protein kinase-like (PK-like) 304 595 IPR011009 -
Alju08g2447 627 FunFam PTI1-like tyrosine-protein kinase 3 393 609 - -
Alju08g2447 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 437 449 IPR008271 GO:0004672|GO:0006468
Alju08g2447 627 Gene3D Transferase(Phosphotransferase) domain 1 393 608 - -
Alju08g2447 627 SMART LysM_2 112 159 IPR018392 -
Alju08g2447 627 SMART LysM_2 178 220 IPR018392 -
Alju08g2447 627 Gene3D LysM domain 111 169 IPR036779 -
Alju08g2447 627 Gene3D Phosphorylase Kinase; domain 1 294 392 - -
Alju08g2447 627 Pfam LysM domain 113 158 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2447 Alju-ChrAlju08 32989003 32996182 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2447 17 627 Receptor kinase-like Gene Family AT3G21630 53.907 0.0 619
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Alju08g2447 PK_Tyr_Ser-Thr 9.6e-45 CL0016