Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2446 ATGGAACCCAGATATGGATTTCTGGCTTTCTTCTTCATCTTCTTCTTCGCTTTAGTTTTTCCCAATGCAGAATCCAGTTGCAGCAAGGGCTGTGATTTAGCTCTAGCTTCTTACTACGTCAGGCCAGGTTCCTATCTCGCATACATAACAAAACAAATGCGATCAGAGATTGTGACAGACGAAACTGTCATCGTCAGCTACAACAAAGATCAAACAATCAGCAGAGATTATGTCCCATCCACAAAAAGAATCAACATCCCTTTCCCATGCGATTGTCTTGAAGGTGAATTTCTAGGTCATGTGTTTCAGCACGAGATTAACCATGGGGATACATACGAGACTGTCGCTGAGTCGTATTATTCCAATTTGGTCACTGTTGAGTCGTTGAGGAAGTTCAATGGCGACACAATACCTGAAAGAGGAACACTTAATGTTACTGTTAATTGTTCTTGCGGTGACAGCCAAGTATCGAAGCTCTATGGATTGTTCATCACATGGCCACTTAGGTCCGAGGACACTTTGGAATCAATTGCCGATCGTGAGAATCTTGAAGCTGGGTTGCTGCAGAAGTATAATCCGGGTGTGAATTTCAGCCAAGGAAGTGGATTGGTTTATATACCAAGCAAAGATCAAAATGGCATCTACGCGGAGTCTAGTTCCAGAGCAGGTCTGTCTGGTGGTGTAATTGCTGGAATATCTGTTGGAGTGGTAGCTGGACTTCTGCTGTTGGCAGTTTCTATATATTTTGGATATTTCAGAAAGAAGATAGATGACACAAAATCACTCTCTCAAGATTTTCAAGAGTTCTCTGTTCAAGAAGAGAAGGATGAGGCCTCTGCTAATGTTGAATCTCAAACTTCAGGATATGGTGGTCCTACTGGCATCACAGTGCATAAATCAGTGGTGTTCTCGTATGAAGAACTAGCTTCTGCCACAAGTAACTTCAGTATGGCTAATAAAATTGGTCAAGGAGGCTTTGGTTCTGTCTATTACGCAGAGCTGAGAGGCGAGAAAGCCGCAATCAAAAAGATGGATATGCAAGCTACAAGAGAATTTATAGCTGAATTAAAAGTCCTAACAAATGTTCATCACCTTAACCTGGTGCGCTTAATCGGATATTGCACTGAGAACTCTCTTTTCCTAGTTTATGAATACATTGGTAATGGAAACTTGAGTCAATATCTGCGTGGCACAGATTTTGGATTAGCTAAACTGACTGAGGTGGGAAACTCATCACTTCCTACTGGTCATCTTGTGGGAACATTTGGATACATGTCACCAGAATATGCTCAGTATGGTGATGTCTCTCCTAAGGTAGATGCCTACGCTTTTGGAGTCGTTCTTTTCGAACTTATTTCTGCCAAGGAAGCAATTGTCAAGACAACTCAATCCGATGCCAACTCAAAGAGCCTTGTAACAATGTTTCATGAAGTTCTTAATCAGCCTGATCCCGCAGAAGATCTTCGCAAATTGGTTGACCCAAGGCTTGGGGATGACTACCCTATTGACTCAGTTTTAAAAATGGCTCAACTCGCAAAAGCATGCACACAAGAGAATCCCCAACTGCGTCCAACTATGAGATCTATTGTAGTTTCTCTCATGTTAATTGGGATGTCAGAGCCTTCTACAGTAGCCTGA 1638 0.4219 MEPRYGFLAFFFIFFFALVFPNAESSCSKGCDLALASYYVRPGSYLAYITKQMRSEIVTDETVIVSYNKDQTISRDYVPSTKRINIPFPCDCLEGEFLGHVFQHEINHGDTYETVAESYYSNLVTVESLRKFNGDTIPERGTLNVTVNCSCGDSQVSKLYGLFITWPLRSEDTLESIADRENLEAGLLQKYNPGVNFSQGSGLVYIPSKDQNGIYAESSSRAGLSGGVIAGISVGVVAGLLLLAVSIYFGYFRKKIDDTKSLSQDFQEFSVQEEKDEASANVESQTSGYGGPTGITVHKSVVFSYEELASATSNFSMANKIGQGGFGSVYYAELRGEKAAIKKMDMQATREFIAELKVLTNVHHLNLVRLIGYCTENSLFLVYEYIGNGNLSQYLRGTDFGLAKLTEVGNSSLPTGHLVGTFGYMSPEYAQYGDVSPKVDAYAFGVVLFELISAKEAIVKTTQSDANSKSLVTMFHEVLNQPDPAEDLRKLVDPRLGDDYPIDSVLKMAQLAKACTQENPQLRPTMRSIVVSLMLIGMSEPSTVA 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2446 545 FunFam PTI1-like tyrosine-protein kinase 3 388 543 - -
Alju08g2446 545 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 11 397 IPR044812 GO:0019199|GO:0045087
Alju08g2446 545 Pfam Protein tyrosine and serine/threonine kinase 317 397 IPR001245 GO:0004672|GO:0006468
Alju08g2446 545 Pfam Protein tyrosine and serine/threonine kinase 398 532 IPR001245 GO:0004672|GO:0006468
Alju08g2446 545 ProSiteProfiles Protein kinase domain profile. 315 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g2446 545 FunFam LysM receptor kinase 2 294 385 - -
Alju08g2446 545 Gene3D Phosphorylase Kinase; domain 1 301 383 - -
Alju08g2446 545 SUPERFAMILY Protein kinase-like (PK-like) 303 539 IPR011009 -
Alju08g2446 545 ProSitePatterns Protein kinases ATP-binding region signature. 321 343 IPR017441 GO:0005524
Alju08g2446 545 Gene3D Transferase(Phosphotransferase) domain 1 384 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2446 Alju-ChrAlju08 32980222 32985811 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2446 8 533 Receptor kinase-like Gene Family AT3G21630 48.485 8.98e-180 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Alju08g2446 PK_Tyr_Ser-Thr 3e-09 CL0016