Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2442 ATGCAATCCCCGGTTCTTCAAAAGCCTGAAGATATTCTATTCTATAACAAAGACACAATACCTAACAAAGACTATATCCCAAGGGACACTCGAGTGAACGTTCCGTTCCCTTGCGATTGCATCGATGAGGGGGCAAATCTAGGTTACGTATTTAAGTACCCGATTCAGAAAGCGGACACCTATACGAAGATTGCGAATCAGATCTATTCCAATTTGACAACTGAATCGTCGTTGCAGAGCCGGAATGGCTATTTGCCGAACAATATTCCCGATTATGTAACGCTCGATGTTGCCGTTAACTGTAGGTGTGGGGATAGCCACATTTCGAAACAGTATGGCTTGTTCATCGCGTACCCACTTAGAGCTGAGGATTCTCTGGATTCAATTGCGAACCAGGCGAAGGTTGATCCAGAGTTGCTGAGAAGGTATAATCCTGGTACTGATTTCAACAGAGGAAGCGGTGTGGTGTTCATACCCGGAAAAGGCCAGAATGGTGTTGATATGCCAATGCCCCCGAGCACAAAAGGTCTAAAAGGTGGGGCTATTGCTGGAATATTTGCTGGTGCAGCAGTTGGTGTTCTCTTATCTGCTTGTATGTGTGTTGTATATTACCAAAAGAAGAAGGAGGAAGAGGTAAAGCTGCTTTCAGGCGAATTAGCAGTCTGCTCTTCTCAACATGGGAAAGGTTCCAATGGTCCTCCTGCTTCTGTTAATACCAACAACACTACCATTACTGTGGACAAATCAGTGGAGTTCTCATATGAAGAACTTGCTCAAGCTACAAATAACTTCTGTATTGCAAATAAAATTGGTCAAGGTGGTTTTGGGGCAGTCTACTATGCAGAGTTGAGAGGGGAGAAAGCTGCAATAAAAATGATGGAGTCGCAAAAATCCAAAGAGTTTCTTGCTGAATTGAATGTGTTAACACGTGTTCATCACCTAAACCTGGTTGCAGATTTTGGGTTGGCCAAGCTGACTGAAGTGGGAAGTTCATCAATTCCCACTGCAAATTTTGCAGGCACATTTGGTTATATGCCACCTGAATATGCATATGGTAGTGTTTCACCAAAAATCGACGTCTATGCGTTCGGAGTTGTTCTTTATGAACTTATATCTGCTAAAGAAGCTGTGTTGAGGGTTGGTGAAGCTGGTTCTGCAACAACAATAGGCCTTGTCTCTTTGTTTGATGAAGCTCTTGAGCGGCCTAATCCTAAAGAACATCTTCAAAAGCTTGTTGATCCTATGCTCGGAGACCAATACCCAATTGACTCAGTCTATAAGATGGCACAAATAGCCAAAATGTGCACAGAGGCAACCCCAGAACGACGTCCAAGTATGAGATCTATTTCTGTGTCTCTCATGACACTTTCGTCTACTTCTGTGGAATGGGATATTGCCTCCTTGCAAGAAAATCCAACACTCGCAAATATGATGTCTGGAAGGTAG 1446 0.4343 MQSPVLQKPEDILFYNKDTIPNKDYIPRDTRVNVPFPCDCIDEGANLGYVFKYPIQKADTYTKIANQIYSNLTTESSLQSRNGYLPNNIPDYVTLDVAVNCRCGDSHISKQYGLFIAYPLRAEDSLDSIANQAKVDPELLRRYNPGTDFNRGSGVVFIPGKGQNGVDMPMPPSTKGLKGGAIAGIFAGAAVGVLLSACMCVVYYQKKKEEEVKLLSGELAVCSSQHGKGSNGPPASVNTNNTTITVDKSVEFSYEELAQATNNFCIANKIGQGGFGAVYYAELRGEKAAIKMMESQKSKEFLAELNVLTRVHHLNLVADFGLAKLTEVGSSSIPTANFAGTFGYMPPEYAYGSVSPKIDVYAFGVVLYELISAKEAVLRVGEAGSATTIGLVSLFDEALERPNPKEHLQKLVDPMLGDQYPIDSVYKMAQIAKMCTEATPERRPSMRSISVSLMTLSSTSVEWDIASLQENPTLANMMSGR 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2442 481 ProSitePatterns Protein kinases ATP-binding region signature. 270 291 IPR017441 GO:0005524
Alju08g2442 481 ProSiteProfiles Protein kinase domain profile. 153 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g2442 481 SUPERFAMILY Protein kinase-like (PK-like) 236 449 IPR011009 -
Alju08g2442 481 Gene3D Phosphorylase Kinase; domain 1 249 320 - -
Alju08g2442 481 Pfam Protein kinase domain 317 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g2442 481 Gene3D Transferase(Phosphotransferase) domain 1 321 476 - -
Alju08g2442 481 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 8 317 IPR044812 GO:0019199|GO:0045087
Alju08g2442 481 FunFam PTI1-like tyrosine-protein kinase 3 302 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2442 Alju-ChrAlju08 32899092 32909578 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2442 293 481 Receptor kinase-like Gene Family AT3G21630 49.010 9.04e-50 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Alju08g2442 Pkinase 1.8e-10 CL0016