Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2441 ATGGTACCCAGATTGGGGTTTCTACTTCTCTTCTTGTTGATATTCTCTCGTTTTCTCAATGCAGAATCAAAGTGTAAGAAAGGATGTGAGTTGGCTCTTGCCTCCTACTACATTTGGGTCGGTCTTCTTGATATTACTTACCTGCCAAAGATTATGAAATCCCCAGTTCTTCAAACAACTCAGGATATCATCAGCTTTAAGAATGGCCAATTATTGAGCGAAAACTATGTCGAAACCGGAGCTCGTGTGAACGTTCCGTTCCCTTGCGCTTGCATCGATGGCGAATTTCTAGGTTACGTATTCGAGTACCAAATTCAGAAAGGAGACACCTATGCGTTGATTGCGAACCGGAATTATGCCAATTTGACCACCGTTTCGATGTTGGAGAGTGCAAATAGGTATTCGCCAGAGAATATTCCTGAATCTGGAACGCTCAATGTGACGGTGAACTGTTCGTGTGGGGATAGAAAAATTTCGAAAGATTATGGGTTGTTCGTCACTTACCCACTTAGAGCTGAGGATTCTTTGGATTCCATTGCCAACATGACGGGGCTTCATCAAGAGTTGCTGCAGAGGTATAATCCTGGTGTTGATTTCAACAAGGGGAGTGGTTTGGTGTATATCCCGGGAAAAGACCAAAATGGTTCCTTTGCGCCTCTGCCCCGTAGCACAAAAGGTCTAAATGGTGGGGCTGTTGCTGGATTATCTGCTGGAGCAGTAGCTGGGTTTCTCTTATTGGCAGCTTGTTTGTATTTTGTATATTATCATAGGAAGGAGAAGGAAAAATTGCTTTCTGAAGAATTAGTAGTCTACTCAACTGGGAATGATTCCAATGGTCCTCCTGCTGCTGCTAGTATTACTGTGGAGAAGTCAGTGGAGTTCTCATATGAAGAACTAGCTCGAGCGACAAACAACTTCAGTATGGCAAATAAAATTGGTGAAGGTGGTTTTGGGGCTGTCTACTATGCGGAGCTGAGAGGCGAGAAAGCTGCAGTTAAAAAAATGAAGTCACAAGATACGAAAGAGTTTCTTTCTGAATTGAAAGTGTTGGCACGTGTTCATCACCTCAACCTGGTACGTTTGATTGGATATTGTGTTAAGAAGCATTTTCTTTTCCTTGTATATGAATATATTGACAATGGAAACTTGCGCGAACACTTAGATCCAGGGAGAGAACCCTTGCCATGGTCAATGCGAGTGCGAATTGCTCTGGATTCGGCCAGAGGTCTTGAGTACATTCATGAGCATACGGTGCCTGCATACATTCATCGTGACATAAAGCCAGCTAATATATTGATAGACCGAGATTTCCATGCAAAGGTTGCAGATTTTGGGTTAACCAAACTCGTTGAAGTGGGAAGTTCGTCATATCTCTCTGAACATCTTGCAGGAACATTTGGTTATATACCACTCCGGAATGATGGCAGCGTTAAAACTGATGTCTATGCTTTTGGAGTTGTTCTCTATGAACTTATATCTGCTAAAGAAGCTGTGCTCAGTGCCAGTGAAGCTGGTTCTGAAGCAAAAACCCTTCTCTCTTTGTTTGAAGAAGCTCTCCAGCAGCCTGATCCTGAAGAACATCTTCTAAAGCTTGTTGATCCCAGGCTTGAAGGCGAATATACATTCAATTCAATCTACAAGATGGTCCAACTAGCCAAGGCGTGCACAGAGGAAAAACCAGACCGACGTCCAAGTATGAGATCTGTTGTGGTGTGTCTAATGACACTCTTATCTTCTATGGAATAG 1746 0.4301 MVPRLGFLLLFLLIFSRFLNAESKCKKGCELALASYYIWVGLLDITYLPKIMKSPVLQTTQDIISFKNGQLLSENYVETGARVNVPFPCACIDGEFLGYVFEYQIQKGDTYALIANRNYANLTTVSMLESANRYSPENIPESGTLNVTVNCSCGDRKISKDYGLFVTYPLRAEDSLDSIANMTGLHQELLQRYNPGVDFNKGSGLVYIPGKDQNGSFAPLPRSTKGLNGGAVAGLSAGAVAGFLLLAACLYFVYYHRKEKEKLLSEELVVYSTGNDSNGPPAAASITVEKSVEFSYEELARATNNFSMANKIGEGGFGAVYYAELRGEKAAVKKMKSQDTKEFLSELKVLARVHHLNLVRLIGYCVKKHFLFLVYEYIDNGNLREHLDPGREPLPWSMRVRIALDSARGLEYIHEHTVPAYIHRDIKPANILIDRDFHAKVADFGLTKLVEVGSSSYLSEHLAGTFGYIPLRNDGSVKTDVYAFGVVLYELISAKEAVLSASEAGSEAKTLLSLFEEALQQPDPEEHLLKLVDPRLEGEYTFNSIYKMVQLAKACTEEKPDRRPSMRSVVVCLMTLLSSME 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2441 581 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Alju08g2441 581 ProSiteProfiles Protein kinase domain profile. 306 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g2441 581 SUPERFAMILY Protein kinase-like (PK-like) 285 573 IPR011009 -
Alju08g2441 581 FunFam LysM receptor kinase 2 285 377 - -
Alju08g2441 581 Gene3D Transferase(Phosphotransferase) domain 1 378 581 - -
Alju08g2441 581 Pfam Protein tyrosine and serine/threonine kinase 308 572 IPR001245 GO:0004672|GO:0006468
Alju08g2441 581 SMART serkin_6 306 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g2441 581 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 9 580 IPR044812 GO:0019199|GO:0045087
Alju08g2441 581 CDD LysM 103 138 IPR018392 -
Alju08g2441 581 ProSitePatterns Protein kinases ATP-binding region signature. 312 334 IPR017441 GO:0005524
Alju08g2441 581 Gene3D Phosphorylase Kinase; domain 1 280 377 - -
Alju08g2441 581 Pfam LysM domain 103 139 IPR018392 -
Alju08g2441 581 FunFam PTI1-like tyrosine-protein kinase 3 378 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2441 Alju-ChrAlju08 32840917 32855153 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2441 1 579 Receptor kinase-like Gene Family AT3G21630 53.667 0.0 619
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Alju08g2441 PK_Tyr_Ser-Thr 7.4e-42 CL0016