Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2440 ATGAAACCCCCAATTCTTCAAAACCCTCAAGATATCGTCAACTATAACAGAGATCAACTATCTAACATAAATTATGTCCAAAGCACAGTTCGCGTGAACGTTCCGTTCCCTTGCGATTGCATCGGTGGTGAATTTCTAGGTTACGTATTCAAGTACCAGATTCAAGCAGGGGATAATTATGTGAAGGTTGCAAGTCAGAGCTATTCGAATCTCACCACTGCTTCGTGGTTGCAGAGCCTGAATAGCTATCCGCCGAATAATTTTCCTAATTCTGGAACGCTGAATGTGACGGTGAACTGTTCGTGTGGGGATAGCCATGTTTCAAAAGATTATGGGTTGTTCATCACTTACCCGCTTAGAGCTGGGGATTCTTTGGATTCAATTGCGAACCAGACGAATCTTGATCGAACATTGCTGCAGAGTTATAATCCTGGTGTTGATTTTAGCAAAGGGAGTGGTGTGGTTTATATCCCGGGGAAAGGCAAAAATGGTGCCTATGTGCCCCTGCCCACTGGTCCAAAAGGTCTAAAAGGTATGGCTATTGCTGGAGTATCAGCTGGGGCAATAGTTGGGGTTCTGTTACTAACAGTTTGTCCTTATCTTGTGTATTACCGAAAGAAAAAGGAGGAAGAGATAAAATTGCTTTCAGAATTAGCAGTATACTCTGCTCAATCTGGGAAGGATTCCAATGGTTCTTCGGCTGCTATTGATACTGGCATCAAAGGCATTACTGTGAACAAATCAGTGGAGTTCTCATATGAAGAACTAGCTCAAGCCACAAATGACTTCAGTATGGAAAAAAAAATTGGTCAAGGTGGTTTTGGGGTTGTCTACTATGCGGAGCTGAGAGGCGAGAAAACTGCAATAAAAAAGATGGAGTCACAAAAATCAAGGGAGTTTCTTGCTGAATTGAAAGTGTTAACACGTGTTCATCACCTAAACCTGGTGCGCTTGATTGGATATTGTGTTAAGAAGGATTCTCTTTTCCTTGTATATGAATATATTGATAATGGAAACTTAAGCCAACACCTGCGAGATTCAGGGAGAGAACCCTTGCCATGGTCCGTGCGGGTGCAAATTGCTCTGGATTCAGCCAGAAGTCTTGAATATATTCACGAGCATACTGTGCCTGTATATATTCATCGTGACATAAAGTCAGATAATATATTGATAGACCGAAACTTCCATGCCAAGGTTGCAGATTTTGGGTTGACCAAGCTCACTGAAGTGGGAATTCCAGCACATCCCACTGACAATCTTGCAGGCACATTTGGTTATATGCCACCTGAATATGCATATGGTAGTGTTTCACCAAAGATTGACGTCTTTGCTTTTGGAGTTGTCCTCTATGAACTTATATCTGCTAAAGAAGCTTTGTTCAGGGCTGGTGAATCTGGTTCTGATACAAAAGGCCTCGTCTCTTTGTTTGAAGAAGCTCTTGAGAAGCCTAATCCAAAGGAACATCTTCAAAAGCTTGTTGATCCTAGGCTCGGTGATCAATACACAATCGATTCAGTTTACAAGATTGCACAGCTAGCCAAAGTGTGCACAGATGGAGACCCAGACCAACGTCCAAGTATGAGATCTGTTGTGGTGACCCTGATGACACTTTCTTCTACTTCTGTGGAATCGGATATTGCCTCCTTGCATGAAAGATCAACATTCTCAGATATGTTCTCCGCAAGGTAG 1689 0.4245 MKPPILQNPQDIVNYNRDQLSNINYVQSTVRVNVPFPCDCIGGEFLGYVFKYQIQAGDNYVKVASQSYSNLTTASWLQSLNSYPPNNFPNSGTLNVTVNCSCGDSHVSKDYGLFITYPLRAGDSLDSIANQTNLDRTLLQSYNPGVDFSKGSGVVYIPGKGKNGAYVPLPTGPKGLKGMAIAGVSAGAIVGVLLLTVCPYLVYYRKKKEEEIKLLSELAVYSAQSGKDSNGSSAAIDTGIKGITVNKSVEFSYEELAQATNDFSMEKKIGQGGFGVVYYAELRGEKTAIKKMESQKSREFLAELKVLTRVHHLNLVRLIGYCVKKDSLFLVYEYIDNGNLSQHLRDSGREPLPWSVRVQIALDSARSLEYIHEHTVPVYIHRDIKSDNILIDRNFHAKVADFGLTKLTEVGIPAHPTDNLAGTFGYMPPEYAYGSVSPKIDVFAFGVVLYELISAKEALFRAGESGSDTKGLVSLFEEALEKPNPKEHLQKLVDPRLGDQYTIDSVYKIAQLAKVCTDGDPDQRPSMRSVVVTLMTLSSTSVESDIASLHERSTFSDMFSAR 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2440 562 FunFam LysM receptor kinase 2 242 334 - -
Alju08g2440 562 ProSitePatterns Serine/Threonine protein kinases active-site signature. 379 391 IPR008271 GO:0004672|GO:0006468
Alju08g2440 562 ProSitePatterns Protein kinases ATP-binding region signature. 269 291 IPR017441 GO:0005524
Alju08g2440 562 SMART serkin_6 263 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g2440 562 FunFam PTI1-like tyrosine-protein kinase 3 335 548 - -
Alju08g2440 562 SUPERFAMILY Protein kinase-like (PK-like) 244 534 IPR011009 -
Alju08g2440 562 Pfam Protein kinase domain 264 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g2440 562 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 8 547 IPR044812 GO:0019199|GO:0045087
Alju08g2440 562 ProSiteProfiles Protein kinase domain profile. 263 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g2440 562 CDD STKc_IRAK 269 537 - -
Alju08g2440 562 Gene3D Transferase(Phosphotransferase) domain 1 335 556 - -
Alju08g2440 562 Gene3D Phosphorylase Kinase; domain 1 237 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2440 Alju-ChrAlju08 32810039 32817226 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2440 8 558 Receptor kinase-like Gene Family AT3G21630 55.117 0.0 602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Alju08g2440 Pkinase 5.7e-45 CL0016