Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2408 ATGGCTACTTTATGTGTAAAGTGTACCATTGAGCTTGAAATTCCAGACATAATCCACAAACATGGCAAATCCATCTCTCTTTCTCACTTGGTGTCAGCTCTCAAAATTCCACCCTCTAAAACTACCTTTGTGAAAGGTCTCATACATTTGCTAGCTCACAATGGCCTCTTCTCTATCACCAAAAGCAACAACAATGAAGAAGAAAGTGAAGAAGAAGTATCATATGATCTCACTTCTGCTTCAAAACTTCTTGTGAGTGGCACAGACCATTGTTTATCTCCAATGGTTCAGTTGGCAACATACCCTTCTATGATTAATTTGTATCATCACTTGGGGAAATGGGTTCGTGGGGAGGAAAACACATTGAGAGAGACAATATTTAACGATGGTAATAATGCTTTGGAGCTTTGTAAACAAAACCCAGCAGATATGGCGGTTGTGCAAGAAGGAATGGCTAGTGATTCGAGATTGATTAAAATGGCTTTGATTAGAGACGTTAAATCTGCTTTTGATGGGTTGAGTTCCATTGTTGATGTTGGTGGTGGAACTGGGACTGTTGCTAAGATTATCTGTGAAGCATTCCCCGATTTGAGATGCCCAGTGCTGGATCTTCCTGAGATTGTTTCAAACTTATCTGGAAATAACAATTGGAATTTTGTTGGTGGGGACATGTTCGAATTCATCCTTCCTGCTGATGCTTCTGTTCTACTGAATTGGGATGATGAAGATTGCATAAAGATACTTAAAAATGCCAAGGAAGCTATCTCAAGCAAAGGAAATGAAGGAAAAGTGATAATCATAGATATGGCTTTGGATGAAGAGCATGACGAGAATGAAATGCTAGAAGCAAAGCTCTTACTCAATATATTCTTCACAGCTAAGCATAATTCAAAAGTTAGATCTGAGCAAGAATGGAAGCAACTCTCCCTAAAGGCAGGCTTCAAGGGTTACATAATGTTTCCTATGATTGGCCTTAGGTCTCTTATTATGCTTCATCCTTAG 1002 0.3912 MATLCVKCTIELEIPDIIHKHGKSISLSHLVSALKIPPSKTTFVKGLIHLLAHNGLFSITKSNNNEEESEEEVSYDLTSASKLLVSGTDHCLSPMVQLATYPSMINLYHHLGKWVRGEENTLRETIFNDGNNALELCKQNPADMAVVQEGMASDSRLIKMALIRDVKSAFDGLSSIVDVGGGTGTVAKIICEAFPDLRCPVLDLPEIVSNLSGNNNWNFVGGDMFEFILPADASVLLNWDDEDCIKILKNAKEAISSKGNEGKVIIIDMALDEEHDENEMLEAKLLLNIFFTAKHNSKVRSEQEWKQLSLKAGFKGYIMFPMIGLRSLIMLHP 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2408 333 PIRSF O-mtase 1 333 IPR016461 GO:0008168
Alju08g2408 333 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 333 IPR016461 GO:0008168
Alju08g2408 333 PANTHER O-METHYLTRANSFERASE 5 316 IPR016461 GO:0008168
Alju08g2408 333 Gene3D Vaccinia Virus protein VP39 86 333 IPR029063 -
Alju08g2408 333 SUPERFAMILY "Winged helix" DNA-binding domain 3 87 IPR036390 -
Alju08g2408 333 CDD AdoMet_MTases 176 259 - -
Alju08g2408 333 Gene3D - 1 84 IPR036388 -
Alju08g2408 333 Pfam Dimerisation domain 5 52 IPR012967 GO:0046983
Alju08g2408 333 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 90 329 IPR029063 -
Alju08g2408 333 Pfam O-methyltransferase domain 108 315 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2408 Alju-ChrAlju08 31513728 31515320 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2408 4 316 Monolignol Biosynthesis Gene Families AT5G54160 29.012 1.33e-26 106