Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2396 ATGGATGGAATTGGAGACGAAACCTCTGAGTTGTTTCATGGCCAAGCTCAATTGTACAGAGTCATAAATCTTTGGATGGCTCCTTTATGTGTAAAGTGTGCCATTGAGCTTGAAATCCCAGACATAATCCACAAACATGGCAAACCCATCTCTCTTTCTCACTTGGTGTCAGCTCTCAAAATTCCACCCTCTAAAACTACCTTTGTGAAAGGCCTCATGCATTTGCTAGCTCACAATGGCCTCTTCTCTATCACCAAAAGCAACAACAATGAAGAAGAAGCATATGATCTCACTTCTGCATCAAAACTTCTTGTGACTGGCACTGGCCATTGTTTATCTCCAATGGTTCAGTTGGCAACATACCCTTCTATGATTAATTTGTATCATCACTTGGGGAAATGGGTTCGTGGGGAGGAAAACACATTGAGAGAGACAATATTTAACGATGGTAATAATGCTTTGGAGCGTTTTAGACAAAACCCAGCAGATATGGCGGTTGTGCAAGAAGGAATGGCTAGTGATTCGAGATTGATTAAAGTGGCTTTGATTAGAGACTTTAAATCTGTTTTTGATGGGTTGAGTTCCATTGTTGATGTTGGTGGTGGAACTGGGACCGTTGCTAAGATTATCTGTGAAGCATTCCCCAATTTGAAATGCACAGTGCTAGATCTTCCTGAGGTTGTTTCAAACTTATCTGGAAATACCAAATGGAATTTTGTTGGTGGGGACATGTTCAAATTCATCCCTCCTGCTGATGCTGTTCTGATTAAGTCTGTTCTACTGAATTGGGATGATGAAGATTGCATAAAGGTACTTAAAAATGCCAAGGAAGCTATCTCAAGCAAAGGGAATGAAGGAAAAGTGATAATCATAGATATGGTTTTGGATGAAGAGCATGACGAGAACGAAATGCTAGAAGCAAAGCTCTTACTCAATATATTCTTCACAGCTAAGCATAATTCAAAACTTAGATCTGAGCAAGAATGGAAGCAACTCTCCCTAAAGGCAGGCTTCAAGGGTTACAAGATGTTTGCTATGTTTGGCCTTAGGTCTCTTATTATGCTTCATCCTTAG 1074 0.4022 MDGIGDETSELFHGQAQLYRVINLWMAPLCVKCAIELEIPDIIHKHGKPISLSHLVSALKIPPSKTTFVKGLMHLLAHNGLFSITKSNNNEEEAYDLTSASKLLVTGTGHCLSPMVQLATYPSMINLYHHLGKWVRGEENTLRETIFNDGNNALERFRQNPADMAVVQEGMASDSRLIKVALIRDFKSVFDGLSSIVDVGGGTGTVAKIICEAFPNLKCTVLDLPEVVSNLSGNTKWNFVGGDMFKFIPPADAVLIKSVLLNWDDEDCIKVLKNAKEAISSKGNEGKVIIIDMVLDEEHDENEMLEAKLLLNIFFTAKHNSKLRSEQEWKQLSLKAGFKGYKMFAMFGLRSLIMLHP 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2396 357 PIRSF O-mtase 1 357 IPR016461 GO:0008168
Alju08g2396 357 FunFam Coniferyl alcohol 9-O-methyltransferase 4 104 - -
Alju08g2396 357 Gene3D Vaccinia Virus protein VP39 107 357 IPR029063 -
Alju08g2396 357 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 19 357 IPR016461 GO:0008168
Alju08g2396 357 PANTHER O-METHYLTRANSFERASE 17 342 IPR016461 GO:0008168
Alju08g2396 357 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 353 IPR029063 -
Alju08g2396 357 Gene3D - 4 104 IPR036388 -
Alju08g2396 357 FunFam O-methyltransferase ZRP4 106 357 - -
Alju08g2396 357 Pfam O-methyltransferase domain 128 339 IPR001077 GO:0008171
Alju08g2396 357 SUPERFAMILY "Winged helix" DNA-binding domain 8 107 IPR036390 -
Alju08g2396 357 Pfam Dimerisation domain 30 77 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2396 Alju-ChrAlju08 30782067 30783715 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2396 4 355 Monolignol Biosynthesis Gene Families AT5G54160 28.926 4.48e-37 135