Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2395 ATGCTAGAAAACAAGGAGAGAGGTCTAGCATCAGCTACTCTTGGTTGGCTTTGTGGTTGTGGATCTGTGTCTCCGGGTGGTAGAAGAAGGGTTTTTGCTTTATTGCAATGGCATTTGATGATTTATATGGACTTGAATGCTCTTCAAGCTGTTCTCGTTCAAGTAGGGGACACAAGTAGTTTTGTAGAAGCCTTTGAAAAGCATGAACAGAAATTCGCACTTGACAAAGTGAAGGTGCAAAGATGGAGGGATGCTTTAAGAGAAGTAGCTAACTTAGCTGGCTGGAACACTGAAAATTGGTATGAAACGAAACTCATTGAAATTGTTGCTGAAACTGTGAGGTCAAAATTAGATGAACAGTTGGACTTAAATGATGACGGTGTGGTCAAACTTGTTGGAATTGATGTAAAAGGAACTGAAGCAATACGTGGTATAGTCGTAAGATTTGACAAACCTTATGTCATACATTTGGATCCTGAAGCCTTCTCAAGTATGAGGAATCTCAAGTTACTCATCATACTACATTTTTCACATGGCCAATTGAATCTTCACGGACTTGAATCCCTTTCTAGCACATTGAAAGTCATAAGATGGGAGAAGTATCCTTTAGATTTCTTGCCAAGTCAAGCTCAATTTAATGAACTTATTGTTCTCCGAATGCAACACAGCAAATTAAAAGAACTTTGGAGGGGAACTCAGTCTTTGCCTCAACTTCCATCGAACCTATCAACTATACATGCTTGTGCTTGTCCATTATTGAAACATTATGTGCGTTCACAACTACTATGGGAATTCATTGAGCAGTTTGAATCTCAGTCAGACTTCTTTATGCAAGCTACTCGCTTATTAGTTATTTCTGGTAGTGAAGTGCCATCATGGTTTCACAATCAAAACTACTTTTGTGCTGAAGATTTCCCTTATGATCTGGATCCTCCAACAAATGTGTCATTCATAGTAAACAAGCCTGATTCATTCAGTTTAAGTGCATGGTGGGGCATAGCCGTATGCTTAGTACTAGAAAATGATTTGGAATCTGCAAAATTAGAAGCTGGCACCCTTTTTTGGGCTTATAGAGTTTCTGAAGGTAGATATTCAAATTCATTTCGTGGTTGTGGCATTTATGTGAAGTCTAGTTGTTGTCACCAACTATGTATCATCTACATTCATTTTTCCTCATTTTTTGCGGAGCAACTTCAATTGGTATTTTTCTCTACCAAGGAAAAAAGTCAGAAGAATCCAGCTTTAAAAATAGGCAAGTGTGGGTGGCGTGTGCTGTCAAAAGAAGATGTTGAGAGATGGAAAAACACAAGAGATAATAAAGACAATAATGATGAGTTCATTGTTAAAGAAGATGAATCTATCTCTGGTGTAGGGCCCATCAGCTCCCTGGTGAGGGATAGGGAATCTCGCTGGAATCCACCTACATCAGGATGGGTGAAGGTGAATGTGAACGGGGCTTTTTCTGTGACAATGGGAGTTGGGTGTGGAGGGGTGATGAGGAATGAAGATGGAGCCTTCCTTGCTGGATTCATGCACCATATAATGGAGGTAGATAGCTTCACTGCAGAGATGTGGGCATTAGTGCTTGGCTTGAAAATGGCTTGGGACAAGGGCTTTCGAAAACTGATTATTGAAACAGACGCAGCTGAAGTAGTTAAGCTATTGCGTGATGAGGACGACGTGATCAGTGCTCAGCCAGGTGCTGGTCTTCTTGTAGAAGCAAAAGCAATGATAATTCGAGATTGGGTGGTGAAGGTGAACAATATCCCTCGAAGCGCCAACCAGGTAGCGTATCACCTTGCGAAATATGCTTTGAATTCCATAACTGGTTATCATCCTGTGTTTAATCCCTCAGAAGACTTGAGTAACTTGATTCGTATGGACTGTAATTACTGCACTTAG 1902 0.4054 MLENKERGLASATLGWLCGCGSVSPGGRRRVFALLQWHLMIYMDLNALQAVLVQVGDTSSFVEAFEKHEQKFALDKVKVQRWRDALREVANLAGWNTENWYETKLIEIVAETVRSKLDEQLDLNDDGVVKLVGIDVKGTEAIRGIVVRFDKPYVIHLDPEAFSSMRNLKLLIILHFSHGQLNLHGLESLSSTLKVIRWEKYPLDFLPSQAQFNELIVLRMQHSKLKELWRGTQSLPQLPSNLSTIHACACPLLKHYVRSQLLWEFIEQFESQSDFFMQATRLLVISGSEVPSWFHNQNYFCAEDFPYDLDPPTNVSFIVNKPDSFSLSAWWGIAVCLVLENDLESAKLEAGTLFWAYRVSEGRYSNSFRGCGIYVKSSCCHQLCIIYIHFSSFFAEQLQLVFFSTKEKSQKNPALKIGKCGWRVLSKEDVERWKNTRDNKDNNDEFIVKEDESISGVGPISSLVRDRESRWNPPTSGWVKVNVNGAFSVTMGVGCGGVMRNEDGAFLAGFMHHIMEVDSFTAEMWALVLGLKMAWDKGFRKLIIETDAAEVVKLLRDEDDVISAQPGAGLLVEAKAMIIRDWVVKVNNIPRSANQVAYHLAKYALNSITGYHPVFNPSEDLSNLIRMDCNYCT 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2395 633 Pfam Reverse transcriptase-like 482 604 IPR002156 GO:0003676|GO:0004523
Alju08g2395 633 Pfam Leucine Rich Repeat 215 233 IPR011713 -
Alju08g2395 633 Gene3D - 42 124 IPR035897 -
Alju08g2395 633 SUPERFAMILY Ribonuclease H-like 477 610 IPR012337 -
Alju08g2395 633 CDD RNase_H_like 481 602 IPR044730 -
Alju08g2395 633 PANTHER OS05G0353850 PROTEIN 466 631 - -
Alju08g2395 633 Gene3D - 477 607 IPR036397 GO:0003676
Alju08g2395 633 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2395 Alju-ChrAlju08 30724689 30731019 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2395 107 234 WRKY Transcription Factor Family AT4G12020 31.387 7.82e-09 57.4