Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2394 ATGGATGGATTTAGAGACAAAACAGCAGATTTGTTTCATGGCCAAGCTCAATTGTACAGAGTCATAAATCTTTGGATGGCTCCTTTATGTCTCAAGTGCGCCATTGAGCTTGAAATACCAGACATAATCCACAAGCATGGCAAACCCATCTCTCTTTTTCAGTTGGTATCAGATCTCAAAATTCCACCGACTAAAGCTACCTTTGTGAAAGGGCTCATGAGCTTGCTGGCTCACAATGGCATCTTTGCCATCATCAAAAGCAACAACAATGAAGAAGAAAGTGAAGAAGTATCATATGATCTCACTTCTGCATCAAAACTTCTTTTGAGTGACACAGACCATTGTTTATCTTCAATGGTTCAATTGAATGTAAGCCCAGCTTTGCTTGATTTGTATCAAAACCTGGGGAAATGGGTTCGTGGGAAAGAAAACACACTGAGAGAGGCATCATGTGGTGTAGGAGTTTATGAATTCCTTACTCAAAACCCAGCAGATTTGGCAGCTTTTCAAGAAGGAATGGCTAGTGATTCTAGATTCATGAAAGTGGCAATGAGAGATTTGGGATCTGTTTTTGATGGGTTGAGTTCCATTGTTGATGTTGGTGGTGGAACTGGTACAACTGCTAAGATTATCTGTGAAGCATTCCCCAATTTGAAATGTATAGTGCTTGATCTTCCTGAGGTCGTAGCAAAAAGCTTACCTGGAAACACCAATTTGAGTTTTGTTGGTGGGGACATGCTCAAATCCATCCCTCATGCTGATGCCATTCTGATTAAGTGGGTTTTACATGACTGGGGTGATGAAGATTGCTTAAAGATACTTAAAAATGCCAAGGAAGCTATTTCAGGCAATAAAAAAGGTGGAAAAGTGATCATCATAGACACAGTATTGGATGAAAAGGAAGACCAGCCAGAAGTGATAGAAACAAAGCTCTTATTCAACATAATCTTGTCAACTGAGTTCAATTCAAAAGAGAGATCTGAGGAAGAATGGAAGCAACTCTTCCTGAAAGCAGGCTTCACAGATTACCAGATATTTCCTATATTTGGCTTTAGGTCCCTCATTGTGCTTCATCCTTAG 1080 0.4 MDGFRDKTADLFHGQAQLYRVINLWMAPLCLKCAIELEIPDIIHKHGKPISLFQLVSDLKIPPTKATFVKGLMSLLAHNGIFAIIKSNNNEEESEEVSYDLTSASKLLLSDTDHCLSSMVQLNVSPALLDLYQNLGKWVRGKENTLREASCGVGVYEFLTQNPADLAAFQEGMASDSRFMKVAMRDLGSVFDGLSSIVDVGGGTGTTAKIICEAFPNLKCIVLDLPEVVAKSLPGNTNLSFVGGDMLKSIPHADAILIKWVLHDWGDEDCLKILKNAKEAISGNKKGGKVIIIDTVLDEKEDQPEVIETKLLFNIILSTEFNSKERSEEEWKQLFLKAGFTDYQIFPIFGFRSLIVLHP 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2394 359 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 19 359 IPR016461 GO:0008168
Alju08g2394 359 Gene3D Vaccinia Virus protein VP39 110 359 IPR029063 -
Alju08g2394 359 Pfam Dimerisation domain 30 77 IPR012967 GO:0046983
Alju08g2394 359 SUPERFAMILY "Winged helix" DNA-binding domain 9 112 IPR036390 -
Alju08g2394 359 Pfam O-methyltransferase domain 132 340 IPR001077 GO:0008171
Alju08g2394 359 Gene3D - 4 108 IPR036388 -
Alju08g2394 359 FunFam Coniferyl alcohol 9-O-methyltransferase 4 108 - -
Alju08g2394 359 CDD AdoMet_MTases 197 297 - -
Alju08g2394 359 PANTHER O-METHYLTRANSFERASE 18 343 IPR016461 GO:0008168
Alju08g2394 359 PIRSF O-mtase 1 359 IPR016461 GO:0008168
Alju08g2394 359 FunFam O-methyltransferase ZRP4 110 359 - -
Alju08g2394 359 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 356 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2394 Alju-ChrAlju08 30702198 30703431 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2394 6 345 Monolignol Biosynthesis Gene Families AT5G54160 30.548 2.67e-43 152