Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2273 ATGGCGCATAGGTTGCTTAGGGATCATGAAATAGATAGTTGGAAACGATCTGACTTTCCCATTATATGCCAATCATGCCTCGGAGACAACCCGTATGTTCGTATGACAAGAGCTGAGTATGATAAAGAGTGTAAGATTTGTGCACGGCCATTTACTGTTTTTAGATGGAGACCTGGTCGAGATGCAAGATATAAGAAGACTGAAATCTGCCAAAGATGTAGTAAATTGAAAAACGTTTGTCAAGTCTGCCTTCTGGATCTTGAGTATGGGTTACCAGTTCAAACTCGAGCTGGCTTGGATTATGAATCCTCCTATGGGAAAGTACGCCCAAACGATACTATCTTGAAGCTTCAAAGGACAACACCATACTACAAAAGAAACCGGGCCCATATTTGCAGTTTCTACATAAGGGGTGAGTGTACCAGAGGAGCTGAATGCCCTTATAGGCATGAGATGCCAGTGACTGGGGAGCTGTCACAACAAAATATCAAAGATCGTTATTATGGGGTGAACGATCCTGTGGCATTAAAGTTACTTGGCAAGGCAGGAGAGATGACATCTCTAGAGCCTCCAGAGGATGAGACCATTAGAACTCTTTATGTTGGTGGGCTTGATGCTCGGATGGCAAAACCTGAGTCTGAAAGTTCTGATCAAACGAAGCAGCAGGCATCTGTGGCTCACAATGGATTGTTGCCTCGAGCCGTCATATCACAGCAGCAGCGACGTCATTACTATAACATTACACCTCCTCCTCAGCAAGACAGAAGCTACTATCCATCAATGGATCCTCAGAGAATGGGTGCTGTTATTCCGTCCCAGGATGGTGGTCCTCCTGGTGGGGCCACCGTGACCGGAGAGAACAACAAACCCAATTTGGAAAAGCAGCAAATACAGTATTTTGCCCAACCAATGATGCCACCTCCACCTGGACAATATCACCATCATCAGTATTATCCCCCTCCCCCTTATGGTTATATGCCACCTGTACCTGGTTATCAACAGTACCCACCACCGTACAACTCTGGGATGGCTATATCTCAGCCACAGCCAGTAAACCAGCCATAA 1065 0.4582 MAHRLLRDHEIDSWKRSDFPIICQSCLGDNPYVRMTRAEYDKECKICARPFTVFRWRPGRDARYKKTEICQRCSKLKNVCQVCLLDLEYGLPVQTRAGLDYESSYGKVRPNDTILKLQRTTPYYKRNRAHICSFYIRGECTRGAECPYRHEMPVTGELSQQNIKDRYYGVNDPVALKLLGKAGEMTSLEPPEDETIRTLYVGGLDARMAKPESESSDQTKQQASVAHNGLLPRAVISQQQRRHYYNITPPPQQDRSYYPSMDPQRMGAVIPSQDGGPPGGATVTGENNKPNLEKQQIQYFAQPMMPPPPGQYHHHQYYPPPPYGYMPPVPGYQQYPPPYNSGMAISQPQPVNQP 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2273 354 FunFam Zinc finger CCCH domain-containing protein 4 118 177 - -
Alju08g2273 354 PANTHER PRE-MRNA-SPLICING FACTOR RBM22 212 277 IPR039171 GO:0003723
Alju08g2273 354 Pfam Torus domain 110 163 IPR032297 -
Alju08g2273 354 SUPERFAMILY CCCH zinc finger 128 151 IPR036855 GO:0046872
Alju08g2273 354 SMART c3hfinal6 126 152 IPR000571 GO:0046872
Alju08g2273 354 ProSiteProfiles Zinc finger C3H1-type profile. 126 153 IPR000571 GO:0046872
Alju08g2273 354 Gene3D - 118 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2273 Alju-ChrAlju08 27035529 27037879 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Alju08g2273 Torus 4.6e-07 CL0537