Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2262 ATGTGCTATGAGGCTCTTCACGTCATTCTTCCATTTGTCAACTTCACCATCAATCCTCTCAGTCCTGTTGATGGCCTCTTGAACACGTTCCTGCACCCTCCCTTGCTTGAGTATCTCCTCCTTTTTCGTCTCAACATTTCTGTTTTTGTTTTTGCCAATCATGCTAAAGCTAAACCACCACCCCACCAACTACTCAGATTTTTGGTCCCTCCTCCTCTTACTCTTTCCGTCTCACTCCCTTTTCATGATGGCTTTCTCTCAAGATTCTTACTTTTTCTTCACTTTCCACTCATTGCATTCTACTGCTATACTTTTTCCTCCTTACTTTTTGTAGATTCCACTCACTGGGGTTCTGTGTTTTTCTGGGTTTGTTCTTCACGCGTGTATGCTTCGTCATTTGATTTCACTGGGTTTCAACCACGAGGTGCTACTTGGGAAGGCATGCAGGCAATTTGTTTGATATTCTTCTTGTATGGAGCGATTGTGTTAGGGAATTCAGATATTGATGCACTACTTGAACTCAAGAAGAGCATTCAGAATGACCCTTCTGGACTAGTTAATTCTTGGGATTCTAGGTCTTTGGCTTCTGACGGATGTCCTCAGAATTGGTATGGGATATTGTGTGACGATGGCAATGTTATATCAATAACTCTGGATAATGCTGGTTTGGTTGGGGAGTTTAATTTCCTTGCCATTAATGGCCTTAAAATGCTTCAAAACTTGTCACTTTCAAACAACCAGTTCACAGGAAGTGTCTCACATTTTGGACCTATGAAGTCGCTAGAATTTCTCGATCTTTCTGTCAACAAGTTTGATGGGTTGGTACCCTCTGACCTGCTTGAATTGCATAACATAGTGTATTTAAATCTTTCATCAAATCAATTTGATGGTACAGTTCCTGTCGGCTTTGACAAACTCAAGTGGTTGAAGTATTTAGATTTGTGCTCTAATAACTTTTCTGGGGATATTATGCATATATTTTCCCATATGGGTGGTGTGGTTCATGTTGACTTAAGCACAAACAGGTTTTCTGGTTCACTGGATTTGGGACTTGGAAACAGCTCGTTTCTCTCCTCGATTCAGTATTTAAATGTTAGCCATAATTCCTTGGCTGGTGATCTGTTTGCTCATGATGGGATGCCATATCTTGACAGCTTAGAGGTCTTTGATGCTAGTAATAATCAATTAGTGGGTAATATACCTTCCTTCACATTTGTGGTATCTCTAAGGATTCTTCGGCTTGGATGCAACCAATTATCTGGTTCTCTTCCAGAAGGTCTATTGAAAGAGAGTTCAATGATGTTGTCTGAACTGGATCTTAGTCAAAACAAGCTTGAAGGTCCTGTTGGAAGCATCACTTCTGGAACTCTGAAAAAGCTTAATTTATCTTCAAACCAACTGTCAGGCCCCATACCTTTCAAGGTGGGCCACTGTGCCATAATTGATTTAAGTAACAACATGTTATCGGGTAACTTGTCGAGAATTCAGTATTGGGGTAATTATGTTGAAGTGATTCAGCTTAGTTCAAACTCATTGACAGGAATGCTTCCTAACCAAACCACACAATTCTTGAGGTTGACTGAACTTAAGATATCTAATAACTCATTAGAGGGCAGTCTCCCTTCAGTCTTAGGAACATACCCTGAACTAAAAGAGGTTGATCTTAGCCACAACCTACTTTCTGGGTTCCTCCTTCCAAGCTTTTTCACCTCAACTAAATTGACCAAGCTTAACCTCTCACACAACAACATGTCTGGGTCAGTATTTTTTCAACAAATTCAAAATAACCCGCTAGTTTCTGTTGAAAATTCTGGTCTAGTGTCTGTTGATCTCTCATACAACAACTTGAGCGGGCATCTATCTGCAGATATAAGTAAGCTTCACAATTTGACAAGTCTCAATCTATGTAACAACAAATTTGAAGGTATTATTCCTGATGATCTTCCTGATCAGCTGAGAGAACTCAACGTGTCCTTCAACAATTTTTCTGGCACTGTGCCTGATAAATTAATGAAGTTTCCTGAATCAGCATTTCACCCAGGAAATTCTTTGCTGATCTTTCCTCATTCGCTTGCTTCACCAAAAGATGACAGCGAACTAGGTTTGAAGGAAAAGGGGCCACATATAAAATCTGCAGCCAAGATTGCCTTGATTGCAAGTCTGGTTTCTGGTGCTTTTGTTATGGCCCTTCTAAGTGTAATAAGTTTTTATAGGGTTCACTGGCAAAAGCAAACAACTGCTCATGAAAATAGAGTGAAGGATATTGCTCCTCAGAGTTCTTCTCCATCTGGTAGTGAAGTGCCTAATCGAAACTTAGAAGCAATATCTTCAACCAAGAAGGGATCTGATGATGTCAGCAATGTTCATACTGCCGTAGAGAAGCTAAAAGATATTGATTTTTCTGAATTTGTTAAGAATGAGGAAGGAATATCATCTCCAATGTCTTTTCTGTCACTTTCAAATCCTTCATCTTCTAGAAGCCACCCATTTGAGAATCCTGGTGCTCTCAAAATATGCTCACCTGATAAATATTTCGGTGATTTGAATCTATTTGATGGGGCCTTGGAGCTCACTGCAGAAGAATTTTCCAGTGCTACAGCGGAAATTATCGGTAGGAGCTGTCATGGAACTCTGTATAAAGCTACACTTGACTCAGGTCATGCGTTGGTTGTCAAGTCATTAAGGGAAGGAATAGCCAAGAACAAGAAGGATTTTGCAAGGGAAGTTAAGAAACTTGGGACCATCAAGCATCCAAGTCTGGTTTCTCTTCAGGGTTACTACTTGGGTCCAAAGGAGACTGATAAGTTCATCATATCAAATTATGTCAATGCACAATCTTTGGACTTTTTTCTTCATGATAGAAGGAATGTTCATCCAATGTCTCTTGATGAAAGGTTGAGGGTGGCTATAGCTGTGGTACAATGTCTGTACTACTTACACAATGAGAAAGCCATACCTCATGGCAATCTCAAATCCACAAACATCCTCCTTGAAATCCCCAACCACAATGTGCTGCTCACTGACTACAGCCTGCATCGGATACTAACAACCGTTGGTACTGCCGACCAAGTTCACAATGCAGGTTTACTTGGCTACCGGCCTCCCGAGTTTGCTAGCTCAAGCAAACCAAGTCCATCCTTGAAGAGTGATGTGTATGCATTTGGGGTGATCTTGTTAGAACTTGTAACAGGAAGAAATTCTGGAGACATTGTTACTGGGATCCCCAGCGTGGTTGTCCTCACTGATTGGGTGCAGTTTTTGGCAGAGCAAAATCGTGGCAGTGAGTGCTTTGATAGGCTGCTCTTAGACAGGCATGGTGGAGGTGGTGGTGGGGACCGCCGGCCTCCCCAAGTTCTTGATGAAATGTTCAAGGTGGCTCTTAGATGCATCCTTCCGGCATCTGAGAGGCCTGATATGCAAACTGTTTTTGAGGATCTTTCAACATTAAGGTAG 3453 0.4127 MCYEALHVILPFVNFTINPLSPVDGLLNTFLHPPLLEYLLLFRLNISVFVFANHAKAKPPPHQLLRFLVPPPLTLSVSLPFHDGFLSRFLLFLHFPLIAFYCYTFSSLLFVDSTHWGSVFFWVCSSRVYASSFDFTGFQPRGATWEGMQAICLIFFLYGAIVLGNSDIDALLELKKSIQNDPSGLVNSWDSRSLASDGCPQNWYGILCDDGNVISITLDNAGLVGEFNFLAINGLKMLQNLSLSNNQFTGSVSHFGPMKSLEFLDLSVNKFDGLVPSDLLELHNIVYLNLSSNQFDGTVPVGFDKLKWLKYLDLCSNNFSGDIMHIFSHMGGVVHVDLSTNRFSGSLDLGLGNSSFLSSIQYLNVSHNSLAGDLFAHDGMPYLDSLEVFDASNNQLVGNIPSFTFVVSLRILRLGCNQLSGSLPEGLLKESSMMLSELDLSQNKLEGPVGSITSGTLKKLNLSSNQLSGPIPFKVGHCAIIDLSNNMLSGNLSRIQYWGNYVEVIQLSSNSLTGMLPNQTTQFLRLTELKISNNSLEGSLPSVLGTYPELKEVDLSHNLLSGFLLPSFFTSTKLTKLNLSHNNMSGSVFFQQIQNNPLVSVENSGLVSVDLSYNNLSGHLSADISKLHNLTSLNLCNNKFEGIIPDDLPDQLRELNVSFNNFSGTVPDKLMKFPESAFHPGNSLLIFPHSLASPKDDSELGLKEKGPHIKSAAKIALIASLVSGAFVMALLSVISFYRVHWQKQTTAHENRVKDIAPQSSSPSGSEVPNRNLEAISSTKKGSDDVSNVHTAVEKLKDIDFSEFVKNEEGISSPMSFLSLSNPSSSRSHPFENPGALKICSPDKYFGDLNLFDGALELTAEEFSSATAEIIGRSCHGTLYKATLDSGHALVVKSLREGIAKNKKDFAREVKKLGTIKHPSLVSLQGYYLGPKETDKFIISNYVNAQSLDFFLHDRRNVHPMSLDERLRVAIAVVQCLYYLHNEKAIPHGNLKSTNILLEIPNHNVLLTDYSLHRILTTVGTADQVHNAGLLGYRPPEFASSSKPSPSLKSDVYAFGVILLELVTGRNSGDIVTGIPSVVVLTDWVQFLAEQNRGSECFDRLLLDRHGGGGGGDRRPPQVLDEMFKVALRCILPASERPDMQTVFEDLSTLR 1150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2262 1150 ProSiteProfiles Protein kinase domain profile. 864 1149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g2262 1150 PANTHER OS07G0626500 PROTEIN 153 1148 - -
Alju08g2262 1150 Gene3D Phosphorylase Kinase; domain 1 848 941 - -
Alju08g2262 1150 SMART LRR_typ_2 282 305 IPR003591 -
Alju08g2262 1150 SMART LRR_typ_2 357 377 IPR003591 -
Alju08g2262 1150 SMART LRR_typ_2 258 281 IPR003591 -
Alju08g2262 1150 SMART LRR_typ_2 406 430 IPR003591 -
Alju08g2262 1150 SMART LRR_typ_2 627 651 IPR003591 -
Alju08g2262 1150 SMART LRR_typ_2 235 257 IPR003591 -
Alju08g2262 1150 MobiDBLite consensus disorder prediction 751 770 - -
Alju08g2262 1150 Pfam Leucine Rich repeat 571 586 IPR001611 GO:0005515
Alju08g2262 1150 MobiDBLite consensus disorder prediction 750 770 - -
Alju08g2262 1150 SUPERFAMILY L domain-like 382 670 - -
Alju08g2262 1150 Pfam Leucine rich repeat N-terminal domain 165 209 IPR013210 -
Alju08g2262 1150 SUPERFAMILY Protein kinase-like (PK-like) 867 1146 IPR011009 -
Alju08g2262 1150 Gene3D Ribonuclease Inhibitor 503 600 IPR032675 -
Alju08g2262 1150 Gene3D Ribonuclease Inhibitor 601 689 IPR032675 -
Alju08g2262 1150 FunFam Leucine-rich repeat receptor-like protein kinase 849 941 - -
Alju08g2262 1150 FunFam Nuclear pore complex protein NUP107 164 325 - -
Alju08g2262 1150 Pfam Leucine Rich Repeat 629 648 IPR001611 GO:0005515
Alju08g2262 1150 Gene3D Transferase(Phosphotransferase) domain 1 943 1150 - -
Alju08g2262 1150 Gene3D Ribonuclease Inhibitor 166 326 IPR032675 -
Alju08g2262 1150 Gene3D Ribonuclease Inhibitor 327 502 IPR032675 -
Alju08g2262 1150 Pfam Protein tyrosine and serine/threonine kinase 868 1066 IPR001245 GO:0004672|GO:0006468
Alju08g2262 1150 SUPERFAMILY L domain-like 166 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2262 Alju-ChrAlju08 26399363 26410160 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2262 154 1150 Receptor kinase-like Gene Family AT1G17750 28.415 5.64e-75 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Alju08g2262 PK_Tyr_Ser-Thr 1.8e-25 CL0016