Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2234 ATGCTGGCAAAGACATCCCAGCGGATGACAGAGCTGATTAAAAGGGGTGATAAGCTTGAACAATTTTTCCATCCTCTTATTGTTCAAGATATAGAGTATCACTCATCTAAACATTTTATGTTCTTCAAGTCAACTGAATTGGCATTTGGTGAACTATTGGAGGCATTGCAAGATGATGATAACTCTATGATTGGGTTGTGGGGTATGGGCGGTTCAGGCAAAACCACATTGGTAACGCAAGTAGGAAAGAAAGCCAAAGAATTAAAGATATTTGATCGAGTTATAATCACAACAGTTTCCCAAACACCAAATATTTTGAAGATTCAAGGAGAAATTGCAGACTTGTTGGGACTCGAGTTGGTGCAAGAAACTGAAGTGGGAAGGGCAAGAAAAATTGCATTGAGATTTCAAAGTCCAAAGGAACGAATTCTGATTATATTGGACGATGTATGGGCTATGTTGAACCTTGAGTATATTGGGAATCCCTTTGGGGATGAAGGTCCAAGAAACTGCAAAGTTCTTCTTACCACACGTCGTAAAGAAGTATGTACTTTGATGGCTTGCCAAAAGATTATTCAACTTAATTTATTAAAAGAAGATGAAGCTTGGAATTTGTTTCAAACTCATGCTAATGTCGATGATGCTGTTAAAGAAGTTGTGGCACGAGCGATTGCTATGGAATGTAAGGGCCTACCGATTGCAATTGTAGCTGTGGGATCTTGCTTGATAGGAAAAGGAATTGATGAGATGGATATAATGTTGCATCGGCTGAGGAATGCAAAGCCTATAAATGTCGATAAAGGTGTGAAGGATGCTTTTGCTTGTCTTGAATTAAGCTATGATTATTTGGCAACTCCAGAAGCCAAGTTGTTGTTGTTAATGTGTGCTATGTTTCCTGAAGATCATAACATTGCTGTTGAAGATCTTTTCACATTTGGAGCAGGGTTAGGCCTATGTAAAGGTGTAGACTCATTTGAAACTGCAAGGAGCCTAGTCAAAGAAACTATAAATAATCTCATTGACTCCTCATTATTGATGTATTCTCCGACGTTAAACACGTATGCACAGAAAAAGGTGACAATGCATGATGTTGTTCGTGATTTTGCTCTGTGGGAAGCATCTAAAGAGGATCGTACCATCATGGTAAATTGTACAAAAGAATTGGATGAATTGATTGTTGATGAAAAGGTAAAAGATTGCTATGCCCTATTCTCATGGTATGCCAATACTAAATTAGTTCAATTTCCTTCTCAATTGAACGCCCCAAAGCTGGAGTTTCTATTGTTACGTTCAAGGAACACCTTGGATGTATCACATACATCATTTGAAGGCAGTAAAGGACTCAAGGCTTTGATTATTATGTGCACATATATCAATAAGATTAAACTACAACCTCAGTCAATCCAACACTTGTCAAATCTTCGAGTTTTGCGGTTGCAATATTGGGATTTACATGACATCTCTTTCGTGGTAAGCCTTAAAGAACTTGAAATTCTTGACTTACGAGGTAGTAAATTTGAAAAAATGCCAAATGGAATTGAAAACTTGAATAAGCTGAAGTTGTTAGATTTGTCAAACTGTACAATAGATGAATGTTGTTATGAAGCTATAGGGAGGTGTTTACAGTTAGAAGAGTTATATGTTTCTATGCACTTCCCCCACTCAAAAAATGAAAATTGCTATGAATACCTTGTGGGCCCTGCTGCTTTGAAGAAATTGAGAAGGTATAAGTTAGAAATTGGGGAGCATAGCGAAGGCGCGGTGTTTCAAAATGAAGGCATCAGATCTTTACGCTTGGGTCACTTAAATATATCTATGTTAGCTGCAAGGATCAAGGGTCTTACACAAAGAGCAACTGCAATTGAATTCTATGAGCTTGAGGGAGGGAGCAAATGTTTCACGCCTAATATTGTCCAAGCTGTAGGAGGCATGAATGAGTTAACTAAACTCTGTCTTGAAAGGTGTTCAGAGATCGAATGCATTACTGACGAAACTACTCATGAAGATGCAGTTTTGCACAGATTGGATGAGTTAATGATACTAGATATGGGTAATCTTAAACAACTATGCCTCGGTCCTTCCCCTGTTAGCTTAGTCCATAAGCTGGAAAGACTAACTATAGCCAAATGCCCTCAATTGCTCCACATATTTCCTGCTGATTGCAACTTAGGAAATCTTAAGTTTCTCGAAATTTTTGATTGTCCGATGCTGACATCTATCTTCCCTGTCTCTACTGCTTGCACTCTGTTATCCTTAGAGAAGCTCCAAATAGAAGACTGCAATGAATTGAAGCATGTATTAGCGGGAGAGGGTGGTGGTGATGCATGGGGGAATTCGAGATTCCCAAAACTGAAAAAGTTGTCCGTAAATGATTGCTGGAAATTAGAATATGCATGCCCAGTCTTTTTAGTTCAAAAATTTGAACAATTGCAGCGCCTATCCATAAAAAATGCTCCTCGGATGAAATTTGTGTTTGGTGAAGAACAACCAATGCATGATCCAGATGAGACTCAGATAGTGCTCCCTGCATTGGAATGTCTCCATCTACAAAAACTTCCAAATCTAGTTGGAATATGTTCAAAGAAGTATTGTCTTAGGCAGTCAGCTATAAAGACAATAACATGCTGGGATTGTCCAAATATGAAATGGCAGGAAATTAGGGGCCATCAACTGAGGAATGAAGAATACAATCCATTGGCAGCTATAAAAAGCATTATACTTGGTAATTGTGGGGTAGAATCCATTTTTCCCTATCAGACTGGGATTAAAGAACAAATTCCCACATTTCAATACCTTCAACAATTAACTTTGGCAAAATGTGCAAGATTGAAAGTTGTCTTTTATACTCATGTCCATCTATGTCTTCCAAATTTAACTTTTGTAACTATATCTGGTTGTGAGGAGTTGGAGGCAATTTTTAGGGAGAATGAAGAGACTCAGAAGAATCTACCCATAGTTGATTCTTGGCTGCGGAAATTGAAGAGTTTGAAAATCTCTAAGTGCAACAAACTTAAATTCATTTTGCCTTTCATGATCGGTGCTACTAACTCAATGCTTCTACAACTAAACACTCTAACCATATCAGATTGTTCTCAAATGGAAGAAGTTTTCAAGTTCTCAAATATTGAAGATCATGACATTGACAGTGAAAGGGAGATTAAGTTCCCAAACATGGAACGTATAGAACTTAAGAACTTGCCAAGACTTGTGAATGTCTGCCGGGGATTTAAGTTGCACATAGGGAAGTATTACAGACTTAAGGTTCATGAATGCCCAAAACTTATGCCAATTATGAATGCAACTATTGATTGGACGAAAGAGAGCCTTGTAAGGAAGTATGAGTTGAAGAAATACCGCCAATTAAATAATAATGAGGCTCTTAATCTTCCACTACCTGTTCTAATTGCTGGAGAGCTTGACATTCAAAGTCCTAAAGTTGAACACAAGTGGCGAGTCATTGGTGATAATGAGCAAGAAGAAACCAACAACTCAAAAATGCTAAGATCTGACCAACAAATGCTAGGAGGTTTTGTTCCCACAAAAGTTTTGTGCTTCCAATATCTTCATTCGTTAGAAGTAACTCACATTAAAAAGTTGAAGTTTTTATTCTCAAAGGGAACTATTGTCCAAAATAGCCTTCCCAAATTGACTTCCCTAACCTTATCTGATTGTGAGATATTGGAGGAAATAATTGCAGAAATAAGTTGTGAAGATGATGCCTACTACGGTGAGACAATCGTGCTTCCAAGCTTGAGGAAGATAAAGCTAATAAATTTGCCAAATTTCATGAGTGTTTATCAAGTAGGGCTGCAGATTAAGGTGGAGCTAAGTGACATTAGCATATGCAACTGCTCCAAATTTGTTGATTCAAGTTTGGGATTGGCTCTTCAACAATTGGGAACAATATCGGTTTCAAAAGAAGATTCAAATTTGCAAATTTCATCGAATGCAGAACAATTGCCCGGAAATGAAGGAAAAAGGATGAAGATTTTGATCTCAAGAGCAGAGAAATTGCGTTTGGAGAATTCAATGAGCCTCACATCCATATGGGAGGGCCCTACTTTCATCAAGTTCCAAAATCTTAAGCGTTTATATGTGATTAAATGTAGAAGATTGAAGTGTATATTGCCAAGCACGGTGATGAGAAGCCTACCATGTTTGGAGTATCTAGAGATTGAAGAATGTGAAGAGTTGGAGGAAGTGATGTTATCAGAAGAAGAAGAGCATAATCACTTTCCAAATGAATCCTCTAATAATTCATTGTGCTTCCCACAAATTCACACTCTTAAAGTCAAGAGATGCAGGAAGTTGAAATGGCTCTTCCCCTCCCTGCCCTCTACTCAACTTCTTCCTCAGTTGAAATCGCTGACGATTGAAGAGTGCTCTCAGCTAAAGGGAGTTTGTAACAGTAAATGTGAAATCCAAGAGGAAGGCTTCTACAACAACTTACTTCCAAAGCTGATATATCTTAAAGTTCAAGATTGCCCCATCTTCTCCGAAACCACACTTGCTGCTCTTCAAAGGCGTGCCAGACGAGAAGATGAATGCAGTGGTTTTATCAGACAAGAAGCTTGTCATAAATGTAATTAA 4590 0.3808 MLAKTSQRMTELIKRGDKLEQFFHPLIVQDIEYHSSKHFMFFKSTELAFGELLEALQDDDNSMIGLWGMGGSGKTTLVTQVGKKAKELKIFDRVIITTVSQTPNILKIQGEIADLLGLELVQETEVGRARKIALRFQSPKERILIILDDVWAMLNLEYIGNPFGDEGPRNCKVLLTTRRKEVCTLMACQKIIQLNLLKEDEAWNLFQTHANVDDAVKEVVARAIAMECKGLPIAIVAVGSCLIGKGIDEMDIMLHRLRNAKPINVDKGVKDAFACLELSYDYLATPEAKLLLLMCAMFPEDHNIAVEDLFTFGAGLGLCKGVDSFETARSLVKETINNLIDSSLLMYSPTLNTYAQKKVTMHDVVRDFALWEASKEDRTIMVNCTKELDELIVDEKVKDCYALFSWYANTKLVQFPSQLNAPKLEFLLLRSRNTLDVSHTSFEGSKGLKALIIMCTYINKIKLQPQSIQHLSNLRVLRLQYWDLHDISFVVSLKELEILDLRGSKFEKMPNGIENLNKLKLLDLSNCTIDECCYEAIGRCLQLEELYVSMHFPHSKNENCYEYLVGPAALKKLRRYKLEIGEHSEGAVFQNEGIRSLRLGHLNISMLAARIKGLTQRATAIEFYELEGGSKCFTPNIVQAVGGMNELTKLCLERCSEIECITDETTHEDAVLHRLDELMILDMGNLKQLCLGPSPVSLVHKLERLTIAKCPQLLHIFPADCNLGNLKFLEIFDCPMLTSIFPVSTACTLLSLEKLQIEDCNELKHVLAGEGGGDAWGNSRFPKLKKLSVNDCWKLEYACPVFLVQKFEQLQRLSIKNAPRMKFVFGEEQPMHDPDETQIVLPALECLHLQKLPNLVGICSKKYCLRQSAIKTITCWDCPNMKWQEIRGHQLRNEEYNPLAAIKSIILGNCGVESIFPYQTGIKEQIPTFQYLQQLTLAKCARLKVVFYTHVHLCLPNLTFVTISGCEELEAIFRENEETQKNLPIVDSWLRKLKSLKISKCNKLKFILPFMIGATNSMLLQLNTLTISDCSQMEEVFKFSNIEDHDIDSEREIKFPNMERIELKNLPRLVNVCRGFKLHIGKYYRLKVHECPKLMPIMNATIDWTKESLVRKYELKKYRQLNNNEALNLPLPVLIAGELDIQSPKVEHKWRVIGDNEQEETNNSKMLRSDQQMLGGFVPTKVLCFQYLHSLEVTHIKKLKFLFSKGTIVQNSLPKLTSLTLSDCEILEEIIAEISCEDDAYYGETIVLPSLRKIKLINLPNFMSVYQVGLQIKVELSDISICNCSKFVDSSLGLALQQLGTISVSKEDSNLQISSNAEQLPGNEGKRMKILISRAEKLRLENSMSLTSIWEGPTFIKFQNLKRLYVIKCRRLKCILPSTVMRSLPCLEYLEIEECEELEEVMLSEEEEHNHFPNESSNNSLCFPQIHTLKVKRCRKLKWLFPSLPSTQLLPQLKSLTIEECSQLKGVCNSKCEIQEEGFYNNLLPKLIYLKVQDCPIFSETTLAALQRRARREDECSGFIRQEACHKCN 1529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2234 1529 Gene3D - 196 279 IPR042197 -
Alju08g2234 1529 SUPERFAMILY RNI-like 899 1093 - -
Alju08g2234 1529 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 294 IPR027417 -
Alju08g2234 1529 Gene3D Ribonuclease Inhibitor 840 1049 IPR032675 -
Alju08g2234 1529 Gene3D Ribonuclease Inhibitor 1138 1305 IPR032675 -
Alju08g2234 1529 Gene3D Ribonuclease Inhibitor 568 824 IPR032675 -
Alju08g2234 1529 Gene3D - 280 371 IPR036388 -
Alju08g2234 1529 SMART AAA_5 60 197 IPR003593 GO:0016887
Alju08g2234 1529 Gene3D - 34 193 IPR027417 -
Alju08g2234 1529 PRINTS Disease resistance protein signature 63 78 - -
Alju08g2234 1529 PRINTS Disease resistance protein signature 514 530 - -
Alju08g2234 1529 PRINTS Disease resistance protein signature 137 151 - -
Alju08g2234 1529 PRINTS Disease resistance protein signature 228 242 - -
Alju08g2234 1529 Pfam NB-ARC domain 51 281 IPR002182 GO:0043531
Alju08g2234 1529 SUPERFAMILY RNI-like 1210 1507 - -
Alju08g2234 1529 FunFam Probable disease resistance protein At1g61300 33 190 - -
Alju08g2234 1529 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 981 1286 - -
Alju08g2234 1529 Gene3D Ribonuclease Inhibitor 1331 1511 IPR032675 -
Alju08g2234 1529 Gene3D Ribonuclease Inhibitor 383 564 IPR032675 -
Alju08g2234 1529 SUPERFAMILY L domain-like 361 866 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2234 Alju-ChrAlju08 25708594 25715041 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2234 64 524 WRKY Transcription Factor Family AT5G45050 24.536 5.32e-14 75.9