Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2223 ATGGCGGTTCAAGTAGCATCACCATCTTCGGCTGGCTTCACCAGCAAAGCCAAGTATAGATATGATGTTTTCCTGAGTTTCAGAGGCGAAGATACTCGCAAATGCTTCACTGTGAATCTCTATGATAGTTTACGTAAGAAGGGAATCAACGCCTTTATTGATGACAGAAAACTTGGTAAAGGGGAACAAATCGCACCTTCTCTTCTAAAAGCCATAGAGAAATCCAGGATTTCGATTATTGTGTTCTCTAAGAACTACGCAACTTCCACTTGGTGCCTTGATGAACTGGCTCACATCATTCAGTGTAAGAAGGAGAAGAACCAGGTGGTTATGCCCTTATTTTACAAGGTGGACCCGATGGATGTTCAATATCAGAGAAACAGCTTTGAGGAAGCCATGGTTGCTCTTGAAGAAAGGTTCATAAATGACGCAGAGAAAGATAGAAATAGCTTTGGGGAAGAAAGAGCTGCTCATGAAAATCGGTTGAGAAAGAACCTGGAGAAACTGCAGAAATGGAGGTCTGCTATGTTTGAAGCTGCTAGTTTGTCATCAGCATGGCTTTTCCAAGACGGATGCGAATTTCGGTTTATTGAAAGGATTGCTGAATATGTGTATGGTATGCTTCCTCCTAAACCATACCATAACAGAGAATACATGGTTGGACTTGAGCCTCGAATAGAAGAAGTGATCTCACTTCTAAGTAAATCTGACCAAGGCGTTTGCATGTTAGGGATTCATGGAACTGGTGGGATTGGCAAAACAACCCTTGCAAAAGCCATCTATAATTCAATCTTCAACGATTTTGAAGGTGCGTGTTTCTTGCTTGATGTCAATGAAGCATCAAAGAAATTCCAGGGCATTGTTCATCTTCAACAAAAACTCCTATCTGAGATTCTTGAGGAAAGGATCACGAGGTTTGGTAGTGCTGGCGAAGGAATATCTAGAATAAAACACAGACTCTCTCATAAAAGAGTTTTGTTGGTTCTTGATGATGTTGATCAGATTGAACAGTTAGAACAACTTGCAGGGGGCTGTGATTGGTTTGGCTGTGGAAGCAAGGTCATTATAACAACAAGAAATAAGCAATTGCTAATTGCTCATAATGTTAAAAGAACATATGAATTGATGGAGCTAAATGATCGTGAATCTCTTGAGCTCTTTTGTCGCAATGCCTTTCTTATGAGCCTACCTCCAAAAGGCTATCAACAAATGTCTAGTCATGTGATAAGTTACGCAAATGGCCTTCCCCTTGCATTAAAATTAATTGGTGCAAATTTAGCAAATAAAAACAAAAAGCAATGGAGGTCTATATTGGAACGATATGATCGGATCCCGGAAAGAACAATACATGAAGTATTAAAGATAAGCTATGATTGCTTACAAGATGGTGCTAAGATTATTTTCTTGGATGTTGCTTGTTTATTTAAAGATGAGTTGTTGAATTCTCTTGGTGAAATAGTACAAGCATGTGGTTCAGGTGCAAGGTTTTATATTGAAGTACTTATTGATAAGTCTCTTATAGCTATTAGTGATAAAGGTCGTTTACGCATGCATGATCTCATAAAACAAATGGGCAAAGAGATTGTGAGGAAGGAAGCACCATCAAATCCTGGCAAACATAGTAGACTATGGAATTATAAAGATGTTCTTAAAGTTTTGCATGAAAATTCAGGAAGTAGGAAAATTGAAGGTATATTATTTGATCCACCTGAAGAAGTAGAAGTAGAGTGGAGTGGTCTAGCTTTTAAGAAGATGACTAATCTTAGAATTCTTATTATTCGAAAAGCCCAATTTTCAACGGGTCCTAAATATCTTCCTGATAATTTAAGATGGCTTGAATGGGAGGGATATCCTTCTACAAATTTACCACCAAAATTTTCTCCAAATAAACTAGTTTTCTTCAAGTTATATTACAGTCCTTTCAGGTTGGAAGAGCCATTGAAGAGATTTGAATGTTTGACATAGTCATTAGGCCATTTATGGTCTCTAGCTTTTCACAAGAAGGAGTTGGATTACTTGCAGGCCATTTTCCCAGCAACAACATTTCCTGATTGGTTCCACAATTCGTGTGAAGGAGGGAAATTTTCTTTTCTTGCTCGTAGGAATTTCCCTCCTCTTGCCATTGCTCTTGCTCTTGGGAAAGCCAACATAAGTAGGATACGAAACTTCCAAATTTCTCTGATCATCAATGGTCGTGTATTATTACAACGTACATTTGGTGCCTATAATACACAACAAGGTCATGTGGTTTTATTGAATCTGGGATCGTATTTTTTGACTGAAGACTGGAGGTGGCTTCAAAGATTATTCACGGAATCGGATTGGAATGATGTGGTGATACATGTAATCAGTGAAAAGCCAGACATAACTGTTGTTAAGTGTGGAGTTTATGTGCACCAACATCAAACAAACATGGAGAATGTACAGTTCAAGTCTCCTTTGCTTTCAACAACATCTCGGAAACGAAGAGCCGTAGCTTCTCCTAATGATAAAGGAAAACCCGGTAACACAAAGAAAGCTTCAAGGTTGAAGTGA 2535 0.3854 MAVQVASPSSAGFTSKAKYRYDVFLSFRGEDTRKCFTVNLYDSLRKKGINAFIDDRKLGKGEQIAPSLLKAIEKSRISIIVFSKNYATSTWCLDELAHIIQCKKEKNQVVMPLFYKVDPMDVQYQRNSFEEAMVALEERFINDAEKDRNSFGEERAAHENRLRKNLEKLQKWRSAMFEAASLSSAWLFQDGCEFRFIERIAEYVYGMLPPKPYHNREYMVGLEPRIEEVISLLSKSDQGVCMLGIHGTGGIGKTTLAKAIYNSIFNDFEGACFLLDVNEASKKFQGIVHLQQKLLSEILEERITRFGSAGEGISRIKHRLSHKRVLLVLDDVDQIEQLEQLAGGCDWFGCGSKVIITTRNKQLLIAHNVKRTYELMELNDRESLELFCRNAFLMSLPPKGYQQMSSHVISYANGLPLALKLIGANLANKNKKQWRSILERYDRIPERTIHEVLKISYDCLQDGAKIIFLDVACLFKDELLNSLGEIVQACGSGARFYIEVLIDKSLIAISDKGRLRMHDLIKQMGKEIVRKEAPSNPGKHSRLWNYKDVLKVLHENSGSRKIEGILFDPPEEVEVEWSGLAFKKMTNLRILIIRKAQFSTGPKYLPDNLRWLEWEGYPSTNLPPKFSPNKLVFFKLYYSPFRLEEPLKRFECLTXSLGHLWSLAFHKKELDYLQAIFPATTFPDWFHNSCEGGKFSFLARRNFPPLAIALALGKANISRIRNFQISLIINGRVLLQRTFGAYNTQQGHVVLLNLGSYFLTEDWRWLQRLFTESDWNDVVIHVISEKPDITVVKCGVYVHQHQTNMENVQFKSPLLSTTSRKRRAVASPNDKGKPGNTKKASRLK 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2223 844 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 643 IPR044974 GO:0006952
Alju08g2223 844 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 209 - -
Alju08g2223 844 Pfam TIR domain 21 139 IPR000157 GO:0007165
Alju08g2223 844 Coils Coil 141 161 - -
Alju08g2223 844 Gene3D - 15 208 IPR035897 -
Alju08g2223 844 PRINTS Disease resistance protein signature 412 426 - -
Alju08g2223 844 PRINTS Disease resistance protein signature 319 333 - -
Alju08g2223 844 PRINTS Disease resistance protein signature 242 257 - -
Alju08g2223 844 Pfam NB-ARC domain 225 442 IPR002182 GO:0043531
Alju08g2223 844 Gene3D - 377 461 IPR042197 -
Alju08g2223 844 SMART till_3 20 182 IPR000157 GO:0007165
Alju08g2223 844 MobiDBLite consensus disorder prediction 821 844 - -
Alju08g2223 844 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 146 IPR035897 -
Alju08g2223 844 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 210 470 IPR027417 -
Alju08g2223 844 SUPERFAMILY "Winged helix" DNA-binding domain 448 553 IPR036390 -
Alju08g2223 844 ProSiteProfiles TIR domain profile. 19 208 IPR000157 GO:0007165
Alju08g2223 844 Gene3D - 209 373 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2223 Alju-ChrAlju08 25383976 25389754 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2223 21 636 WRKY Transcription Factor Family AT4G12020 28.480 1.90e-67 243