Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2205 ATGCATATCAGCACGGCTGACTTGCGTCTATCATTTGGCGCTTCGGTTGGGAACAGTGAAGCAGCCAAAACTTCATCCGCTGAGAGTTCGCTACACGTTTTGACAGAAAATATGGAAATTGTTCGATCTCACGTCCATCGGAATATCTCCACAGTTGACGCTGTTAACACCCTTCCACTCTATCGTTCTGCCCCACCGCTTGAGGTCAGGCTCGAGGATTTCGAGCTATACGCCATGGATCGTCTTCGAGTTCTCAAGGGGATTTCTGATGGTTTATCTCGGGGGAAGAAACCTGAAGAAATGGATCAATTAGTAAAAAATTTATGGAAAACGCATATGAGTCATCAACTGGCATCTGAAGTTGTAAATAAGGATATTATATCTCATTTTGTTCTACGGCTTGTGTATTGCCGAACTGAGGACTTGAGGAAATGGTTCCTTTCTATGGAAAATTCACTATTTCGCTACCGATTTCGTCTTGAAAATGCTGAAGCTCAGAGGGCAATCATGGCAGAATTCGACCTTCCTTACAAGGCTGTTAACCATGTGGAATTTGAGAGTGTGAAGGACAAATTGGAACAAGTTGCACGGTCCATTGGCCCGCCTCTACGTGACAATGACACTTCATTCTACAAGGTACCATTTGAAGAAGTTCCTGAGCTCGTGGCTGGTCGGAAAGTATTTATAAATCAAGGTTATGCTTATGTTAGAATGAATCAGCGCATTGTATTTGTATATGTGCTTGCTCAAAACAGTAAATCTTCTCCTTTACTTCTTTGCCTGGCACTGTACTTTTCCGATTCTTGTCTATCAACTTTGCCAAATTTAGTACTAGAATTGATGAAGATTGTGGAAGCCCTGTGCTCAAGTTATCTAGGTCCTGACTATTCTCAGCCAAGCGAGTACGCTCAAATATCATTAAAGGATATTGATCAAGTTGCTAAGAGTTCATTTCCATTGTGCATGCGTCATCTATTTGAAAAGTTGAGAGAGGATCACCATTTAAAGCATGGAGGGAGGATGCAACTAGGTCTCTTTCTCAAGGTTGCATTGACTACTTGTCTGAGTATATTCTATAAAGTCAAGAGTGGTGTTGGTCTGAATCTGGATGATGCACTTGCATTTTGGAGACATGAATTCTCTCAAAAGGTTGGACTGGAGAGGTTTGAGAAAGAGTATGCATACAGCATACGCCATAATTATGGAAAGGAAGGGAAGAGAACTGACTATAGTCCCTATTCTTGTCAAAAGGTTATTTCATCAACTCCTGGTGTTGGAGATCATCATGGATGCCCCTATCGACACTTCAGCGAGGAGAATCTTCGAGCTGCTCTTAACAGAACGGGGGTGAATGGTCGGGCAATCGAAGACGTAATGGACAAAGTACGAAATAGACATTACCAGCTGGCTTGCACCCTGACATTTGAAGCTATTCATGGCAAGCAATGTGATGCGGGGATTAACCATCCAAATCAATACTTCAGTGACAGCCAAAAGATACTGAAGCCAAAGGTAATAGTTATACTGCAAATCATGACTGAAACTTTTATTGGTGGAAAACTCCTGGGAATCAATTGCTGTGCTACTGGCGCAGGATCCTCCGAACGCATCTTAATGTTCAAGTTCCACGGCATCCCTGACCTGAGGCGTTGA 1653 0.4271 MHISTADLRLSFGASVGNSEAAKTSSAESSLHVLTENMEIVRSHVHRNISTVDAVNTLPLYRSAPPLEVRLEDFELYAMDRLRVLKGISDGLSRGKKPEEMDQLVKNLWKTHMSHQLASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMENSLFRYRFRLENAEAQRAIMAEFDLPYKAVNHVEFESVKDKLEQVARSIGPPLRDNDTSFYKVPFEEVPELVAGRKVFINQGYAYVRMNQRIVFVYVLAQNSKSSPLLLCLALYFSDSCLSTLPNLVLELMKIVEALCSSYLGPDYSQPSEYAQISLKDIDQVAKSSFPLCMRHLFEKLREDHHLKHGGRMQLGLFLKVALTTCLSIFYKVKSGVGLNLDDALAFWRHEFSQKVGLERFEKEYAYSIRHNYGKEGKRTDYSPYSCQKVISSTPGVGDHHGCPYRHFSEENLRAALNRTGVNGRAIEDVMDKVRNRHYQLACTLTFEAIHGKQCDAGINHPNQYFSDSQKILKPKVIVILQIMTETFIGGKLLGINCCATGAGSSERILMFKFHGIPDLRR 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2205 550 CDD PriL_PriS_Eukaryotic 60 497 IPR016558 -
Alju08g2205 550 FunFam DNA primase large subunit 42 268 - -
Alju08g2205 550 Gene3D - 20 251 - -
Alju08g2205 550 PANTHER DNA PRIMASE LARGE SUBUNIT 54 504 IPR007238 GO:0006269
Alju08g2205 550 Pfam Eukaryotic and archaeal DNA primase, large subunit 210 494 IPR007238 GO:0006269
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2205 Alju-ChrAlju08 25027718 25036472 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2205 38 505 Core DNA Replication Machinery Family AT1G67320 59.208 0.0 595