Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2190 ATGAAAGACTGTGTCTCTTCAACCACTCCAGAGTCTGAAATATCAGCTAGCTTTATGACTTATATGGGTGTAAACCATGGACGGATGAAAGAAAATGAAGCGCGTAGATATTTCCAGCAGCTTATAAATGCTGTTGATTATTGCCATAGCAGGGGTGTCTACCACCGAGACCTAAAGCCAGAAAATTTGCTATTAGATGCTTCTGGAAATCTTAAAGTTTCCGATTTTGGGTTAAGTGCTCTCTCCCAACAAGTCAAGGATGACGGACTGCTGCATACTACATGTGGAATTCCTAATTATGTAGCTCCTGAGGTCCTTACTGATAGAGGCTATGATGGGGCGACCGCAGATTTGTGGTCATGTGGGGTGATTCTCTTTGTATTGCTTGCAGGTTACCTGCCTTTCGATGAACCTAATCTCGTGAACCTGTATAAAAAAATCTCAGCTGCTGAATTTACTTGCCCCCCTTGGCTTTCTTTCAGTGCCAGGAAACTGATCACTCGAATCTTGGATCCAAACCCAGAAACTCGTATCACGATACCTGAGATTCTAGAAGACGAATGGTTTAAGAAAGATTACAAACCTCCTGTTTTTGATGAGAAAGGGGAGGCCAACATTGATGATGTTGAAGCTGTCTTTAAAGACTCCGAAGAGCACCATGTGACAGAGAAGAAAGAAGAACAGCCAACACCGATGAATGCGTTTGATTTAATCTCCATGTCCAAAGGGCTGAACCTTGAAAATTTGTTTGATATAGAGCAGGGATTTAAAAGGGAAACAAGATTTGCTTCAAAATGCCCTGCCAACGAGATAATCAACAAGATTGAAGAAGCTGCAAAACCTCTTGGTTTTGATGTGCACAAGAAAAATTACAAGATGAGGCTTGAAAACGTAAAGGCTGGAAGGAAAGGAAATCTGAATGTTGCCACAGAGGTATTTCAAGTGGCACCTTCTCTTCACATGGTTGAGGTGAGGAAAGCAAAAGGTGATACGTTGGAGTTCCACAAGTTTTACAAAAATCTATCGACAACTCTCAAGGATGTGGTCTGGAAAAGTGAAGATGATATGCAAGAAACAAAGTGA 1083 0.4155 MKDCVSSTTPESEISASFMTYMGVNHGRMKENEARRYFQQLINAVDYCHSRGVYHRDLKPENLLLDASGNLKVSDFGLSALSQQVKDDGLLHTTCGIPNYVAPEVLTDRGYDGATADLWSCGVILFVLLAGYLPFDEPNLVNLYKKISAAEFTCPPWLSFSARKLITRILDPNPETRITIPEILEDEWFKKDYKPPVFDEKGEANIDDVEAVFKDSEEHHVTEKKEEQPTPMNAFDLISMSKGLNLENLFDIEQGFKRETRFASKCPANEIINKIEEAAKPLGFDVHKKNYKMRLENVKAGRKGNLNVATEVFQVAPSLHMVEVRKAKGDTLEFHKFYKNLSTTLKDVVWKSEDDMQETK 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2190 360 ProSiteProfiles NAF domain profile. 227 251 IPR018451 GO:0007165
Alju08g2190 360 Pfam Protein kinase domain 25 189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g2190 360 ProSitePatterns Serine/Threonine protein kinases active-site signature. 53 65 IPR008271 GO:0004672|GO:0006468
Alju08g2190 360 Pfam NAF domain 229 288 IPR004041 GO:0007165
Alju08g2190 360 Gene3D Transferase(Phosphotransferase) domain 1 17 196 - -
Alju08g2190 360 SUPERFAMILY Protein kinase-like (PK-like) 24 218 IPR011009 -
Alju08g2190 360 SMART serkin_6 1 189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g2190 360 ProSiteProfiles Protein kinase domain profile. 1 189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g2190 360 CDD CIPK_C 233 347 - -
Alju08g2190 360 FunFam Non-specific serine/threonine protein kinase 18 196 - -
Alju08g2190 360 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 23 342 - -
Alju08g2190 360 Gene3D Kinase associated domain 1, KA1 226 351 - -
Alju08g2190 360 FunFam Non-specific serine/threonine protein kinase 226 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2190 Alju-ChrAlju08 24285897 24290146 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2190 24 332 CBL-interacting serine-threonine protein kinases AT2G26980 77.023 0.0 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Alju08g2190 Pkinase 1.6e-43 CL0016