Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2182 ATGGGCAACTCTTGCATGAAGCCAGTTGCTCATGTTAATTCCTCCAATTTGTCTGGAAGTACAAAGTCAAGTAAGACGCAACAAAATTATAATTCTTCAGAAAAAAAGCCTTCTTTGCAAAGTTCAGCATCTGATCCTGTCAGACCCATTTCCAATAATCTCAAGTCCTTTAGCTTCAATGATCTGAAGGAAGCCACCAAGAACTTCCGTGAAGAAAATTTTATCGGAGAGGGAGGTTTTGGGCGTGTCTTCAAGGGATGGATTAACATGAGCACCTTTGCTCCTTCCAAACCAGGGAGTGGAATGGTAGTGGCCATTAAGCAGCTCAAACCAGAAAGCTTTCAAGGCCACAAGGAATGGCTTACTGAAGTCAATTATCTAGGGCAGCTTCACCACGAGAATCTGGTGAAACTTATTGGTTATTGTTCAGAGGATAGAAATAGGCTTCTAGTTTATGAGTTCATGCAAAAAGGAAGCTTGGAGAATCATATATTTAGAAAAGGTGTTCAACCCCTATCTTGGCCGACCCGGATCAGTATTGCGATTGGTGTTGCAAGAGGATTAGCATTCTTGCATAGCCTGGATGCAAATGTCATCTACCGTGATTTAAAGGCTTCTAACATCCTACTTGATTCGGATTTCTATCCAAAGCTTTCGGATTTTGGTTTGGCCAGAGATGGTCCTACTGGAGATAACACTCACGTTTCAACAAGAGTTATTGGAACTCAAGGCTATGCTGCACCAGAGTATGTAGCAACAGGTCACTTGACTCCAAGAAGTGATGTCTACAGCTTTGGTGTCGTCTTGCTAGAGTTGTTAACCGGGAGACGAGCATTAGAAGATGACAGATCCGGGTCCATAGAAGAAACTCTGGTGGACTGGGCAAGGCCTTTTCTGAGTGATAACCGGCGAGTTTTGAGGATCATGGATACGAGGCTAGGTGGCCAATACTCCAAGAAAGGAGCTCAAGCTGCCGCTGCACTTGCATTGCAATGCTTGACCTCAGATCCTAGATACAGACCTCCAATGGTGGATGTTCTTGCCGCGTTGGAATCTCTCAGTTCTTCAAGTTCAACCCCAAGGACCCCAAAATCTTACAGTGATAATATTTCAAACAGGCATTCAAGTCCTAGTCATCCCCAAAAGTCAATCAGACATCAAAGAACAGCACCGAACCCACCAAATGATGCAGTCATGGGTGAAAAGTTAAAGGAAAAGGACGGATTTGGGTGGAGAATGGAGGAGAAGTGTGTAAGAGGTAAAGAGAATGAAGAATGTGTAAGAATGAGTGAAGAAGATGATAAAAATGGGAGTGTTGGAACCCTTCTTGATGGAAAAGTTGGCTGGAACAAAGCCTTTTCCGCTAAGGATAGAGCTTTTCTATCAGACAAAGTTTCCAACGGAGCTGGAAGTCTATATAAAGATGGTAAGCAATTTGTTCCTACTAAGGAGCTTGGAGATGCTTCCATATCTGCTGAGAATACTAGGTCTCAACATGCACATTCTGCCAAGGACATCAAGAATTTATTCAGTAGCTATATAAAGAATAAAAGAGCAAGGGATGAGGAAAAGGAGAAATAG 1581 0.4288 MGNSCMKPVAHVNSSNLSGSTKSSKTQQNYNSSEKKPSLQSSASDPVRPISNNLKSFSFNDLKEATKNFREENFIGEGGFGRVFKGWINMSTFAPSKPGSGMVVAIKQLKPESFQGHKEWLTEVNYLGQLHHENLVKLIGYCSEDRNRLLVYEFMQKGSLENHIFRKGVQPLSWPTRISIAIGVARGLAFLHSLDANVIYRDLKASNILLDSDFYPKLSDFGLARDGPTGDNTHVSTRVIGTQGYAAPEYVATGHLTPRSDVYSFGVVLLELLTGRRALEDDRSGSIEETLVDWARPFLSDNRRVLRIMDTRLGGQYSKKGAQAAAALALQCLTSDPRYRPPMVDVLAALESLSSSSSTPRTPKSYSDNISNRHSSPSHPQKSIRHQRTAPNPPNDAVMGEKLKEKDGFGWRMEEKCVRGKENEECVRMSEEDDKNGSVGTLLDGKVGWNKAFSAKDRAFLSDKVSNGAGSLYKDGKQFVPTKELGDASISAENTRSQHAHSAKDIKNLFSSYIKNKRARDEEKEK 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2182 526 MobiDBLite consensus disorder prediction 353 390 - -
Alju08g2182 526 PANTHER OS01G0588500 PROTEIN-RELATED 32 353 - -
Alju08g2182 526 ProSiteProfiles Protein kinase domain profile. 69 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g2182 526 SMART serkin_6 69 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g2182 526 FunFam Serine/threonine-protein kinase BIK1 36 154 - -
Alju08g2182 526 SUPERFAMILY Protein kinase-like (PK-like) 45 358 IPR011009 -
Alju08g2182 526 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 155 364 - -
Alju08g2182 526 CDD STKc_IRAK 75 346 - -
Alju08g2182 526 MobiDBLite consensus disorder prediction 1 49 - -
Alju08g2182 526 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Alju08g2182 526 Gene3D Phosphorylase Kinase; domain 1 40 154 - -
Alju08g2182 526 Gene3D Transferase(Phosphotransferase) domain 1 155 374 - -
Alju08g2182 526 MobiDBLite consensus disorder prediction 353 401 - -
Alju08g2182 526 ProSitePatterns Protein kinases ATP-binding region signature. 75 107 IPR017441 GO:0005524
Alju08g2182 526 Pfam Protein tyrosine and serine/threonine kinase 73 348 IPR001245 GO:0004672|GO:0006468
Alju08g2182 526 MobiDBLite consensus disorder prediction 8 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2182 Alju-ChrAlju08 23914733 23921646 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2182 13 368 Glycoside Hydrolase AT3G07070 46.260 1.90e-101 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Alju08g2182 PK_Tyr_Ser-Thr 4.3e-47 CL0016