Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2161 ATGCCTACGTACCAACACATGATGGGAAACCTTTTCTGTCGATTCTCCTTCATGTTCTCCTTGCTTTTTCATGTCATGGTTTGCCCAGGTTTATGTCTCTCCAATTTTACATATTCCGATGAATTGGCGCTTCTTGCTTTCAAATCTTCTGTTAGGGATCCTTACAATCACTTGAAAAACTGGTCCAATTCATCTTCCATATGCAATTGGTCTGGGATTACATGTGATTCTAAGAATGAAAGAGTGAGAATACTGAGTCTTGCTAAGATGGGTCTCGAAGGAACCTTACTCTCACAAATTGGCAATTTGTCCTTCCTAGTACAACTTGACCTCAACAACAACAGCTTGTATGGTAAGTTGCCAGAAGAGTTGCTTCAGTTGCAGAGGTTAAAAACTCTAAACTTGAGCTATAATGCATTCAGTGGAGAGATCCCAGATTGGATAGGAAGCTTATTTACGCTTCAACACTTAGTTCTTGGCAATAATAGCTTTGGAGGTATCATTCCTCCCACTATATCCAATTTGACTAAGTTGGAGACCTTGGATTTAAATTCTAATTCTCTCCAAGGATCTATTCCCTCTGATATTGGAGGGCTTCAACATCTCAAAATTTTACGCCTTTCTGCAAACAGGCTTCAAGGAATTATACCTCCAACTATTTTTAACATATCTTCACTTGAGCTTATCTCTTTGTCTCTCAACCTCTTACAAGGACATATTCCCATAGAAATGAATAAGCTTACAAAGCTGAAAATTATATACTTGGGAGGTAACAAGTTGACTGGCCAAATACCAAGAAGTATTGGAAACTTGATCATGCTTCAAGAATTATCTCTTTCAAGCAATAACTTACAAGGAGATATTCCCAACGAAATTAGCAATCTTACAAATGTGAACAATATATACTTGGATGATAATCAATTGTCTGGTTCCATACCAAAGAGCATCGGAAAATTGAATATGCTTAAAGAGTTATCTCTTGCCAACAATAACTTAGAAGGAAATATTCCAAATGAAATTAGAGGCCTTACAAATCTGAAAATTATAGACCTATCAGTTAATCAACTATTTGGCCACATACCAAGAGGCATTGGAAACTTGACTATGCTTCAAGAAGTAATTCTTGAAAGAAATAATTTAGAAGGCTCAATACCTCTGGAAATAGGCAATCTTCAACAACTTGAGACGTTATTGTTGTCTCAAAACAAGTTGAGGGACTCTATTCCATCAGAAATTTTCAACATCTCAACTTTGAAAGTCTTATCTCTCTCAAACAATTCTCTATCAGGAAGTCTTCCATCAGATTTTGGTTATGGCCTTTCTAATCTACAAAGGTTGTATCTATGGGGCAACAAACTTTCCGGAAAAATCCCAAATACTATATCCAATGCTTCTAAGATAACCATTCTATCATTGGAGCAAAATAATTTTGATGGGGTTTTACCAAGAACACTTGGGGATTTAAGATACTTAGAAACCCTTTGGGTATTTGATAACAATTTCACCATAATAGATGCCTCCAATTCTGAAACTGGCTTTTTTAGCTCGCTGTCAAATTCTAGACATTTGAAAAGTCTGATTCTCTCAATGAATCCATTGCATATGAAACTTCCCAAGTCCATTGCAAACTTGTCTGATTCTCTACAGACGCTGAGGATAGAATTTTGCGGGATTAATGGTAACATACCATCAGAAATTGGGAATCTGTCTAACTTGGTTCATCTATCTTTTGCTAAAAATTTTTTAAATGGTTCAATTCCAACAACAATTAGCAACTTAAAAGATCTTCAGTTTCTGAGTCTTGTGGGCAATGAGCTAGATGGTTTGATTGTTGACGAACTTTGTGACATTAGAAGACTTGCATATTTATATCTATCTCGAAACAAGTTTTCTGGAGCAATACCGTCTTGCTTAGGAAATCTTGTGTCCCTGCGAGCGCTTCACTTGGGCTCCAATAAGTTTATTTCCGAGATACCCTCTTCCTTTTGGAATTTGACTGGTATATTGCAAGTAAACCTATCTTCCAACATATTAGTTGGAAATCTTTCATTCAAGATTGGGAATATGAAAGCTCTTATTCTTTTAGATATGTCAAGAAATCATATTTCAGGCATCATTCCGACGACCATAGGTAGCTTGCAGAATTTGCAAATTTTCTCCTTAGCGCATAACATATTGCAAGGGACAATTCCAGAATCACTTGAGAATTTGCTAAGCTTAGAAGAGCTAGACCTTTCCCGCAATAATTTGACTGGTGAGATTCCCACATCACTAGAGTCACTTACATCCCTTAAGTATGTCAATCTCTCTTATAACCAACTACAAGGTGAGATTCCAAGTGGTGGGGTCTTCAAAGATTTGACGGCTGAATCTTTCATGATGAATAAAGCACTTTGTGGCGAGCCAAAAATGCAAGTGCCTCCATGCAGAGAAGAAAAACGATCAATGACAAAATTGATTTTGTTGAAATGCATACTACCCGTTGTTCTGTCAACAATTTTGGTTGTTTCAGGCATTATCCTCTTTCAACGTAAACGAAAGAAATCTAGGCATGCCATGAAACAAGATTTTTCAACTTTAGGAATGCCTAGAAGAATTTCTTATTTTGAGATTTTGGATGCAACCAATAGATTTGATGAGAGTAACTTATTAGGAAGGGGAGGTTTTGGTTCTGTGTTCAAAGGAAGGCTTTCAAGTGGAGTAATTGTTGCTTTTAAAATATTCAATTTTGATTCAGAAGCATTGTCAAGGAGCTTTGAAGTTGAATGTGACACAATGCGTAATGTGCGTCATCGCAATTTGGTGAGGATCATAAGTAGTTGTTCCAATGACTACTTCAAGTGTTTGATAATGGAGTTCATTGCTAATGGAAGTCTTGAAAAATGGTTATACTCTCATAATTACTATCTGGATTTTCTGCAAAGGTTAAATATAATGATAAATGTTGCATCAGCTTTGGAATATCTGCATCATGGCTTGCCAACGCCAATTGTTCACTGTGATTTGAAGCCAAGTAACATTTTGTTGGATGATAACATGGTTGCTCGTGTTAGTGACTTTGGAATTGCAAAATTTTTAGATGAAGGGAAATCTAAGACTCATACAGAGACAATATCTACAATTGGTTATGTTGCACCTGAATATGGATCAGTTGGAATTGTTTCAACAAAAGTAGATGTGTACAGCTACGGAATAATACTAATGGAAGTATTCACAAGAAAAAGGCCAACAGAAGATATGTTTGTAGATGGATTGAGCTTGAAGAGTTGGGTGAGTATATCAATGTCACCTGCTTTATTAACTCAAGTCATAGATTCCAATTTATTACAAGGAGATGAACAATATATTGGTAATGTTTTGACAACTACATCCTCTATTCTTGAATTGGCCTTGAATTGTTGCGCCAGTTCTTCACAAAGGCGTTGCAATATGTCACATGTTGTGGTATCCCTAAACAAGATCAAGGACCTGTTTCTGCAAAAATGTCATTCAAAGAAATATTGA 3504 0.3633 MPTYQHMMGNLFCRFSFMFSLLFHVMVCPGLCLSNFTYSDELALLAFKSSVRDPYNHLKNWSNSSSICNWSGITCDSKNERVRILSLAKMGLEGTLLSQIGNLSFLVQLDLNNNSLYGKLPEELLQLQRLKTLNLSYNAFSGEIPDWIGSLFTLQHLVLGNNSFGGIIPPTISNLTKLETLDLNSNSLQGSIPSDIGGLQHLKILRLSANRLQGIIPPTIFNISSLELISLSLNLLQGHIPIEMNKLTKLKIIYLGGNKLTGQIPRSIGNLIMLQELSLSSNNLQGDIPNEISNLTNVNNIYLDDNQLSGSIPKSIGKLNMLKELSLANNNLEGNIPNEIRGLTNLKIIDLSVNQLFGHIPRGIGNLTMLQEVILERNNLEGSIPLEIGNLQQLETLLLSQNKLRDSIPSEIFNISTLKVLSLSNNSLSGSLPSDFGYGLSNLQRLYLWGNKLSGKIPNTISNASKITILSLEQNNFDGVLPRTLGDLRYLETLWVFDNNFTIIDASNSETGFFSSLSNSRHLKSLILSMNPLHMKLPKSIANLSDSLQTLRIEFCGINGNIPSEIGNLSNLVHLSFAKNFLNGSIPTTISNLKDLQFLSLVGNELDGLIVDELCDIRRLAYLYLSRNKFSGAIPSCLGNLVSLRALHLGSNKFISEIPSSFWNLTGILQVNLSSNILVGNLSFKIGNMKALILLDMSRNHISGIIPTTIGSLQNLQIFSLAHNILQGTIPESLENLLSLEELDLSRNNLTGEIPTSLESLTSLKYVNLSYNQLQGEIPSGGVFKDLTAESFMMNKALCGEPKMQVPPCREEKRSMTKLILLKCILPVVLSTILVVSGIILFQRKRKKSRHAMKQDFSTLGMPRRISYFEILDATNRFDESNLLGRGGFGSVFKGRLSSGVIVAFKIFNFDSEALSRSFEVECDTMRNVRHRNLVRIISSCSNDYFKCLIMEFIANGSLEKWLYSHNYYLDFLQRLNIMINVASALEYLHHGLPTPIVHCDLKPSNILLDDNMVARVSDFGIAKFLDEGKSKTHTETISTIGYVAPEYGSVGIVSTKVDVYSYGIILMEVFTRKRPTEDMFVDGLSLKSWVSISMSPALLTQVIDSNLLQGDEQYIGNVLTTTSSILELALNCCASSSQRRCNMSHVVVSLNKIKDLFLQKCHSKKY 1167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2161 1167 FunFam Serine-threonine protein kinase plant-type 858 953 - -
Alju08g2161 1167 PANTHER OS04G0122200 PROTEIN 389 1156 - -
Alju08g2161 1167 SMART serkin_6 878 1158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g2161 1167 ProSiteProfiles Protein kinase domain profile. 878 1159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g2161 1167 ProSitePatterns Serine/Threonine protein kinases active-site signature. 997 1009 IPR008271 GO:0004672|GO:0006468
Alju08g2161 1167 Gene3D Phosphorylase Kinase; domain 1 848 953 - -
Alju08g2161 1167 Gene3D Ribonuclease Inhibitor 39 152 IPR032675 -
Alju08g2161 1167 ProSiteProfiles Leucine-rich repeat profile. 739 762 IPR001611 GO:0005515
Alju08g2161 1167 Gene3D Ribonuclease Inhibitor 153 243 IPR032675 -
Alju08g2161 1167 Gene3D Ribonuclease Inhibitor 244 335 IPR032675 -
Alju08g2161 1167 Gene3D Ribonuclease Inhibitor 336 434 IPR032675 -
Alju08g2161 1167 FunFam Receptor-like protein kinase 7 198 411 - -
Alju08g2161 1167 Gene3D Ribonuclease Inhibitor 435 506 IPR032675 -
Alju08g2161 1167 Gene3D Transferase(Phosphotransferase) domain 1 954 1165 - -
Alju08g2161 1167 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 516 813 - -
Alju08g2161 1167 SUPERFAMILY RNI-like 192 502 - -
Alju08g2161 1167 Gene3D Ribonuclease Inhibitor 507 817 IPR032675 -
Alju08g2161 1167 SUPERFAMILY L domain-like 82 242 - -
Alju08g2161 1167 FunFam Leucine-rich repeat receptor protein kinase EMS1 412 504 - -
Alju08g2161 1167 Pfam Leucine rich repeat N-terminal domain 39 76 IPR013210 -
Alju08g2161 1167 SMART LRR_typ_2 247 270 IPR003591 -
Alju08g2161 1167 SMART LRR_typ_2 343 367 IPR003591 -
Alju08g2161 1167 SMART LRR_typ_2 271 295 IPR003591 -
Alju08g2161 1167 SMART LRR_typ_2 199 223 IPR003591 -
Alju08g2161 1167 SMART LRR_typ_2 761 786 IPR003591 -
Alju08g2161 1167 SMART LRR_typ_2 440 464 IPR003591 -
Alju08g2161 1167 SMART LRR_typ_2 689 712 IPR003591 -
Alju08g2161 1167 SMART LRR_typ_2 175 198 IPR003591 -
Alju08g2161 1167 SMART LRR_typ_2 737 760 IPR003591 -
Alju08g2161 1167 SMART LRR_typ_2 391 415 IPR003591 -
Alju08g2161 1167 SMART LRR_typ_2 319 342 IPR003591 -
Alju08g2161 1167 SMART LRR_typ_2 103 127 IPR003591 -
Alju08g2161 1167 SMART LRR_typ_2 641 664 IPR003591 -
Alju08g2161 1167 Pfam Protein kinase domain 879 1148 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g2161 1167 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 954 1164 - -
Alju08g2161 1167 Pfam Leucine rich repeat 249 308 IPR001611 GO:0005515
Alju08g2161 1167 Pfam Leucine rich repeat 618 676 IPR001611 GO:0005515
Alju08g2161 1167 Pfam Leucine rich repeat 715 774 IPR001611 GO:0005515
Alju08g2161 1167 Pfam Leucine rich repeat 393 453 IPR001611 GO:0005515
Alju08g2161 1167 Pfam Leucine rich repeat 153 212 IPR001611 GO:0005515
Alju08g2161 1167 SUPERFAMILY Protein kinase-like (PK-like) 853 1151 IPR011009 -
Alju08g2161 1167 ProSitePatterns Protein kinases ATP-binding region signature. 884 906 IPR017441 GO:0005524
Alju08g2161 1167 SUPERFAMILY L domain-like 547 802 - -
Alju08g2161 1167 SMART LRR_sd22_2 343 369 - -
Alju08g2161 1167 SMART LRR_sd22_2 247 273 - -
Alju08g2161 1167 SMART LRR_sd22_2 569 595 - -
Alju08g2161 1167 SMART LRR_sd22_2 440 466 - -
Alju08g2161 1167 SMART LRR_sd22_2 175 201 - -
Alju08g2161 1167 SMART LRR_sd22_2 713 736 - -
Alju08g2161 1167 SMART LRR_sd22_2 737 763 - -
Alju08g2161 1167 SMART LRR_sd22_2 391 417 - -
Alju08g2161 1167 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 37 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2161 Alju-ChrAlju08 23414975 23443234 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2161 30 1155 Receptor kinase-like Gene Family AT5G46330 34.801 0.0 567
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Alju08g2161 Pkinase 4.6e-44 CL0016