Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2154 ATGGGAAACCTTATCTTTCAATTCTGCTTCATGTTCTCCATGCTTTATCTCATGGTTTGCCCAGGTTTATGTCAGTCCAATTTTACAAATTCCGATGAATTGGCGCTTCTTGCTTTCAAATTTTCTGTTAGGGATCCTTATAATCATTTGGAAAACTGGTCCAATTCGTCTGCCATATGCAATTGGTCTGGGATTACATGTGATTCTAAGAATGAGAGAGTGAGAATACTGAGTCTCGCTAAGATGGGTCTCAAAGGAACCTTACCCTCACAGATTGGCAATTTGTCCTTCCTAGTACAACTTGACCTCAACAGCAACAACTTTTATGGTAAGTTGCCAGAAGAGTTACTTCAGTTGCAGAGGTTAGAAATTCTGAACTTGAGCTATAATGCATTCACTGGAGAAATCCCAACTTGGATAGGAAGCTTATTTACACTTCAACACCTGGCTCTTGGAAATAATAGCTTTGGAGGTATCATTCCTCCAACTATATCCAATTTGTCTAAGTTGGAGACCTTGGATTTGAAATCTAATTCTATCAAAGGATCTATTCCGCTTGATATTGGAAGGCTTCAACATCTCAAGATTTTACTCCTTTCAAGGAACAGGCTTTCAGGATTTATACCTCCAACTATTTCTAACATATCCTCACTTGAGCGCCTCTCTTTGTCTCTCAACCTCTTACAAGGACCTATTCCCAAGGAAATGAATAAGCTTACAAAGCTGAAAGTTATATACTTGGAAATTAATAAGTTGACTGGCCAAATACCTAGAAGTATTGGAAACTTGATCATGCTTCGGGAATTATATCTTTCAAGCAATAACTTACAAGGAAATATTCCCGACGAAATTAGCAATCTTACAAATGTGAATAAAATTTACTTGGGTGAGAATCGTTTGTCTGGTCACATACCAAAAAGCATTGGAAAATTGACTATGCTTGAAAAGTTATCTCTTGCCAACAATAACTTAGAAGGAAATATTCCCAATGAAATTAGAAGCCTTGCAAATCTGAAATATATAGACCTATCAGTCAATCAGCTATTTGGCCACATACCAAGAGGCATTGGAAATTTGACTATGCTTCAACATCTATATCTTGGAAGCAATAACTTAGAAGGCTCAATACCAATGGAAATAGGAAATCTTCAACAACTCGAGGTTTTATCGTTGTATCAAAACAAGTTGAGCGAATCTATTCCATCACAAATTTTCAACATCTCAAGTTTGAAAGCCTTGTCTCTCTTGAACAATTCTCTATCGGGAAGTCTGCCATCATACTTTGGATATGGCCTTTCTAATCTACAAGAGTTGTATTTGTGGGGCAACAAACTTTCCGGAAGAATCCCAAGTACTATATCCAATGCTTCTAACTTAAACATTCTAGAATTGGAGGAAAATAATTTTGAAGGGATTTTACCTAGCACACTTGGGCGTTTAAGATACTTAGAAACCCTTCAAGTATATGATAACCATTTAACCATAACAGATGCTTCAAATTCTGAAACTGGCTTTTTTAGCTCGTTGTCAAATTGTAGACATTTGCAAAATCTGGATCTTTCAAAGAATCCATTGCATATGAAACTTCCCAAGTCCATTGGAAACTTGTCTGATTCTCTACAGACGCTGATGATAGACTCTTCCGGTATTAATGGTAACATACCATCAGCAATTGGGAATCTGTCAAGCTTGTTTGAGCTATCTTTTGCTGAAAATTTTTTAAATGGATCAATTCCTCCAACAATTAGCAACTTACAGGCTCTTCAGCGTTTGAGTCTTGTGGGCAATGATCTAGATGGTTTGATTGTTGATGAGCTTTGTGACATTAAAAGACTTGCATATTTATATCTATCTCGAAACAAGTTTTCAGGAGCAATTCCGCCTTGCTTAGGAAATCTCATCTCCCTGCGAGAGCTTTACTTGGGTGCCAATAAGTTGACTTCCGAGATACCCTCTTCCTTTTGGAATTCGACAGGTATATTGAAAGTGAACCTATCTTCCAACATGTTAGTTGGAAATCTTTCATTCAAGATTGGGAACATGAAAGCTCTTATTCTGTTAGATTTGTCGACAAATCATATTTCGGGCATCATTCCAACAACCATAGGCAGCTTGGAAAATTTGGAAATTTTCTCATTAGCACATAACATATTGCAAGGGACAATTCCGGAGTCACTTGGGAATTTGTTAAGCTTAGAAGAAATAGACCTTTCCCAAAATAAGTTGTCTGGTGAGATTCCTAACTCGCTAGAGTCGCTTAGATCCCTTGAGTATGTCAATCTCTCTTATAACCAACTACAAGGTGAGATTCCAAGGGGTGGGATCTTTAAAAATTTGACAGCTGAATCTTTCATGATGAATAAAGCACTTTGTGGTGAGCCAAATATGAAAGTGCCTCCATGCAGAAAAGAACAAAGAAAAAGGTCATCAATGGCAAAATTGATTTTGTGGAAATGCCTACTACCCTTGTTTTTGTCAACAATTTTGGTTGTTGCGGTCATTATCCTCTTTCAACGCAAACGAATGAGTTCTAGGCACACCATGAAACAAGATTTATTAACTTCAGGGATGCCAATAAGGATTTCGTATTTTGAAATTTTGGACGCAACAAACAGATTTGATGACAGTAACTTACTTGGAAAGGGGAGCTTTGGTTCTGTGTTCAAAGGAAGGCTTTCAAGTGGAACAGTTGTTGCTTTCAAAATATTCAATTTTGATTCAGAAGAATTGTCAAGGAGCTTTGAAGTGGAATGTGACACAATGCGTAATGTTCGTCATCGCAATTTGGTGAAGATCATTAGTTGTTGTTCCAATGATGACTTCAAGTGTTTGATAATGGAGTTCATTCCCAATGGCAGTCTTGAAAAATGGTTATATTCTTATAACTATTGTCTTGATTTTCTGCAAAGGTTAAATATAATGATAGATATTGCCTCTGCTTTGGAATATCTCCATCATGGCTTGGCAACATCAATAGTCCACTGTGACTTGAAGCCAAGTAATATTTTGTTGGATGATAACATGGTTGCTCATGTGAGTGACTTTGGAATTGCAAAATTTCTAGATGAAGGGAAATCTAAGACTCATACAGAAACAATACCTACAATTGGCTATGTTGCACCTGAATATGGATCTGTTGGAATTGTTTCAGCAAAAGTAGATGTGTACAGCTACGGAATAACACTAATGGAAGTATACACAAGAAAAAGGCCAACAGAAGAAATGTTTGTGGATGGATTGAGCTTGAAGAGTTGGGTAAGTCAATCCATGTCACCTGCTTTATTAACTCAAGTCATAGATTCCAATTTATTACAAGGAGATGAGCAATATATTGGTAATATTTTGGCAACCACATCCTCTATTCTTGAATTGGCCTTGAATTGTTGCGCCAATTCCTCACAAAGGCGTTGCAATATGTCACATGTTGTGATATCATTAAACAAGATCAAGGACATGTTTATGCAAACATGTTATTCAAAGAAATGTTGA 3489 0.3692 MGNLIFQFCFMFSMLYLMVCPGLCQSNFTNSDELALLAFKFSVRDPYNHLENWSNSSAICNWSGITCDSKNERVRILSLAKMGLKGTLPSQIGNLSFLVQLDLNSNNFYGKLPEELLQLQRLEILNLSYNAFTGEIPTWIGSLFTLQHLALGNNSFGGIIPPTISNLSKLETLDLKSNSIKGSIPLDIGRLQHLKILLLSRNRLSGFIPPTISNISSLERLSLSLNLLQGPIPKEMNKLTKLKVIYLEINKLTGQIPRSIGNLIMLRELYLSSNNLQGNIPDEISNLTNVNKIYLGENRLSGHIPKSIGKLTMLEKLSLANNNLEGNIPNEIRSLANLKYIDLSVNQLFGHIPRGIGNLTMLQHLYLGSNNLEGSIPMEIGNLQQLEVLSLYQNKLSESIPSQIFNISSLKALSLLNNSLSGSLPSYFGYGLSNLQELYLWGNKLSGRIPSTISNASNLNILELEENNFEGILPSTLGRLRYLETLQVYDNHLTITDASNSETGFFSSLSNCRHLQNLDLSKNPLHMKLPKSIGNLSDSLQTLMIDSSGINGNIPSAIGNLSSLFELSFAENFLNGSIPPTISNLQALQRLSLVGNDLDGLIVDELCDIKRLAYLYLSRNKFSGAIPPCLGNLISLRELYLGANKLTSEIPSSFWNSTGILKVNLSSNMLVGNLSFKIGNMKALILLDLSTNHISGIIPTTIGSLENLEIFSLAHNILQGTIPESLGNLLSLEEIDLSQNKLSGEIPNSLESLRSLEYVNLSYNQLQGEIPRGGIFKNLTAESFMMNKALCGEPNMKVPPCRKEQRKRSSMAKLILWKCLLPLFLSTILVVAVIILFQRKRMSSRHTMKQDLLTSGMPIRISYFEILDATNRFDDSNLLGKGSFGSVFKGRLSSGTVVAFKIFNFDSEELSRSFEVECDTMRNVRHRNLVKIISCCSNDDFKCLIMEFIPNGSLEKWLYSYNYCLDFLQRLNIMIDIASALEYLHHGLATSIVHCDLKPSNILLDDNMVAHVSDFGIAKFLDEGKSKTHTETIPTIGYVAPEYGSVGIVSAKVDVYSYGITLMEVYTRKRPTEEMFVDGLSLKSWVSQSMSPALLTQVIDSNLLQGDEQYIGNILATTSSILELALNCCANSSQRRCNMSHVVISLNKIKDMFMQTCYSKKC 1162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2154 1162 SUPERFAMILY RNI-like 77 397 - -
Alju08g2154 1162 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 401 496 - -
Alju08g2154 1162 SUPERFAMILY Protein kinase-like (PK-like) 847 1146 IPR011009 -
Alju08g2154 1162 Gene3D Ribonuclease Inhibitor 28 178 IPR032675 -
Alju08g2154 1162 Gene3D Ribonuclease Inhibitor 429 498 IPR032675 -
Alju08g2154 1162 Gene3D Ribonuclease Inhibitor 330 428 IPR032675 -
Alju08g2154 1162 Gene3D Phosphorylase Kinase; domain 1 857 948 - -
Alju08g2154 1162 Gene3D Ribonuclease Inhibitor 179 235 IPR032675 -
Alju08g2154 1162 ProSitePatterns Protein kinases ATP-binding region signature. 879 901 IPR017441 GO:0005524
Alju08g2154 1162 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 949 1158 - -
Alju08g2154 1162 ProSiteProfiles Protein kinase domain profile. 873 1154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g2154 1162 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 306 400 - -
Alju08g2154 1162 Pfam Protein kinase domain 875 1143 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g2154 1162 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 508 805 - -
Alju08g2154 1162 FunFam Serine-threonine protein kinase plant-type 854 948 - -
Alju08g2154 1162 Pfam Leucine Rich Repeat 337 359 IPR001611 GO:0005515
Alju08g2154 1162 PANTHER RECEPTOR-LIKE PROTEIN 55 507 1151 - -
Alju08g2154 1162 Gene3D Ribonuclease Inhibitor 236 329 IPR032675 -
Alju08g2154 1162 Gene3D Transferase(Phosphotransferase) domain 1 949 1160 - -
Alju08g2154 1162 SMART LRR_typ_2 681 704 IPR003591 -
Alju08g2154 1162 SMART LRR_typ_2 383 407 IPR003591 -
Alju08g2154 1162 SMART LRR_typ_2 311 334 IPR003591 -
Alju08g2154 1162 SMART LRR_typ_2 335 359 IPR003591 -
Alju08g2154 1162 SMART LRR_typ_2 633 657 IPR003591 -
Alju08g2154 1162 SMART LRR_typ_2 432 456 IPR003591 -
Alju08g2154 1162 SMART LRR_typ_2 95 119 IPR003591 -
Alju08g2154 1162 SMART LRR_typ_2 729 752 IPR003591 -
Alju08g2154 1162 SMART LRR_typ_2 753 778 IPR003591 -
Alju08g2154 1162 SMART LRR_typ_2 167 191 IPR003591 -
Alju08g2154 1162 SMART LRR_typ_2 263 287 IPR003591 -
Alju08g2154 1162 SMART LRR_typ_2 561 585 IPR003591 -
Alju08g2154 1162 FunFam Piriformospora indica-insensitive protein 2 208 305 - -
Alju08g2154 1162 SMART LRR_sd22_2 432 458 - -
Alju08g2154 1162 SMART LRR_sd22_2 167 188 - -
Alju08g2154 1162 SMART LRR_sd22_2 239 265 - -
Alju08g2154 1162 SMART LRR_sd22_2 512 538 - -
Alju08g2154 1162 SMART LRR_sd22_2 561 587 - -
Alju08g2154 1162 SMART LRR_sd22_2 729 761 - -
Alju08g2154 1162 SMART LRR_sd22_2 191 217 - -
Alju08g2154 1162 SMART LRR_sd22_2 705 728 - -
Alju08g2154 1162 SMART LRR_sd22_2 335 361 - -
Alju08g2154 1162 SMART LRR_sd22_2 633 654 - -
Alju08g2154 1162 SMART LRR_sd22_2 383 409 - -
Alju08g2154 1162 ProSitePatterns Serine/Threonine protein kinases active-site signature. 992 1004 IPR008271 GO:0004672|GO:0006468
Alju08g2154 1162 Gene3D Ribonuclease Inhibitor 499 810 IPR032675 -
Alju08g2154 1162 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Alju08g2154 1162 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 29 188 - -
Alju08g2154 1162 SUPERFAMILY RNI-like 413 773 - -
Alju08g2154 1162 Pfam Leucine rich repeat 145 204 IPR001611 GO:0005515
Alju08g2154 1162 Pfam Leucine rich repeat 707 766 IPR001611 GO:0005515
Alju08g2154 1162 Pfam Leucine rich repeat 433 493 IPR001611 GO:0005515
Alju08g2154 1162 Pfam Leucine rich repeat 266 324 IPR001611 GO:0005515
Alju08g2154 1162 SMART serkin_6 873 1153 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2154 Alju-ChrAlju08 23073405 23086736 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2154 10 1150 Receptor kinase-like Gene Family AT5G46330 33.894 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Alju08g2154 Pkinase 2e-43 CL0016