Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2148 ATGAGGAAGAAACTCGATACTCGTTTCCCTGCCGCTCGGATTAAGAAAATTATGCAATCGGATGAGGATGTAGGGAAGATTGCCATGGCCGTGCCTCTTCTTGTTTCTAAAGCACTAGAACTCTTTCTGCAAGATTTATGTGATCGGACATATGAAATAACATTGAGAAGAGGGGCAAAGACAATGAATTCCTTTCATTTAAAACAATGTGTACAGACTTTTAATGTCTTCGATTTTCTAAAAGATATTGTCAGCAAGGTTCCTGATTTAGGTGGCCACGCTGCTTCTGGAGATGACCGTACTATCTATAAGAGAAGGAAAGTCGATGAAAATGGAAATGAGTGTGACGATGATGTAAAAAGAAATAAGATGTCAGAAAATGCACATCATGCTGGTGGTAGAGGAAGAGGTCGGGGCAGAGGCAGGGGTCGTGGCCGAGGAAGCAGAACAACAGATCGAGAGATTAACGCACATGTCAAGTCTGAAGATGATCATCATCATACTGATGGAATGAAGCACCATCACATGCACACTCACAGCAATGAAAGCATGGAAATTAGTACAGAACATGAAGTAAAGCCTTCCATTGGCAAGACATCAGAAGCATGCTTTAGAAATTTCGACTTAAATATGGATCCTGTGGACGTGGACGTGGATGTGGACGAGGATGGGGATTCGCCAACCAGCAAAGCTCCTGTCCCACCTTGTCCATCCGAAAAGCCTACCTCAACAACTTGTCCATCCGAAAAACCAGCCACAACTTGTCCATCTCAAAAACCAATCGTAGAATTGAAACACGAAGAAATCCCTGGGTGGTCGTTGTCTGATGTGGAAAAAATGGCCATTGATCCTATCCAACTGGTCAACATGAATAGAAGGATGGATGAAGAAGATGAAGATTATGATGAAGAAAGTTGA 918 0.427 MRKKLDTRFPAARIKKIMQSDEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLRRGAKTMNSFHLKQCVQTFNVFDFLKDIVSKVPDLGGHAASGDDRTIYKRRKVDENGNECDDDVKRNKMSENAHHAGGRGRGRGRGRGRGRGSRTTDREINAHVKSEDDHHHTDGMKHHHMHTHSNESMEISTEHEVKPSIGKTSEACFRNFDLNMDPVDVDVDVDEDGDSPTSKAPVPPCPSEKPTSTTCPSEKPATTCPSQKPIVELKHEEIPGWSLSDVEKMAIDPIQLVNMNRRMDEEDEDYDEES 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2148 305 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Alju08g2148 305 SUPERFAMILY Histone-fold 4 88 IPR009072 GO:0046982
Alju08g2148 305 Coils Coil 287 305 - -
Alju08g2148 305 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 123 - -
Alju08g2148 305 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Alju08g2148 305 MobiDBLite consensus disorder prediction 145 184 - -
Alju08g2148 305 MobiDBLite consensus disorder prediction 111 184 - -
Alju08g2148 305 MobiDBLite consensus disorder prediction 220 259 - -
Alju08g2148 305 FunFam dr1-associated corepressor homolog 1 86 - -
Alju08g2148 305 MobiDBLite consensus disorder prediction 111 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2148 Alju-ChrAlju08 22789649 22793234 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2148 1 126 CCAAT-HAP5 Transcription Factor Family AT3G12480 67.669 1.75e-56 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Alju08g2148 CBFD_NFYB_HMF 1.5e-18 CL0012