Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2105 ATGGCTTCTTCACGTTCAATTATAAGGAATTTGCCTGGCTTTTCTGGTGACCTCCCATTCAAGCTTGAATCTGGATACATAGGCGTGGGAGAAGAAGAGGAAGTGCAATTATTTTATTTATTTGTGGAATCTCAAAGAAATCCCTCAAAAGATCCAATCTTACTTTGGTTTGTTGGAGGCCCTGGTTGCTCTGCCTTTTCTGCATTTCTGTTTGAAAATGGACCAGTAACAATTGATCGCAATTCCAGTGGGATTCTTCCAACACTTGTGTTAAACCCTTATGCTTGGACACAGGTACTCAATGTCATGTACATAGATTTACCGGTTGGCACTGGATTTTCTTACTCTGAAACACAAGAAGGCTACCATAGCAGTGATTTACTATGGATAGAGAATACATATGATTTTCTTCAAAAGTGGTTTATGGATCATCCTGAGTTTGGCTCAAATCCGTTTTATGTTGGTGGTGGTTCATATTCAACTATGCCTACTGTTCCTCTTGTTCAAAAATTATATGAAGGTTACAGAGCAGGAAGCAATCCACTCATAAATATCAAAGGTCTTGTGCTTGCCAGCCCATCCACTGATGTGTTTCTGGATTTCAACTCCGTAGTTGTTTTTGCACACCAGTTGAGTCTTATATCGGATGAGCTCTATGAGTCAATTAAAGAAAGTTGTAATGGTGATTATGTCAACATTAATCCAGACAACACAAAGTGTGCCTCAGATTATGAAGCTTTCTCTCGGCTGATTCGTTACATAAACATAAATCAAATTCTGGAACCTGTTTGCATTAGTACACCCGATCTCAAAGACAGAATTCTCTTGGAAGATTCATCACCAGAAGGGATCTTCCAGTCATTGCAGAAAGTTTCAGATTTCTGGTGTCGTGGTTATGATCACATGCTTGTTAACCAATGGGCAAATAATGAGGACGTTAGGAAGGCTCTTCATATTAGAGAGGGAACTAAAGGGGAGTTCTTGAGATGCAACAAGAGTTTATCATACGAAGTTCATCTACGAAGTGTTGTTGATTATCATCGCAATTTCACTGAGACGAACCTTCAATGTCTTGTATACTGTGCTGATCTTGACATGTCCGTACCACATATTAGTACTCAAGCTTGGATAAGGTCTTTGAACATGAAAATAGAGGATCCTTGGCGTGCATGGTTTGTTGATGGTCAAGTTGCAGGATACACACAACTCTACAAGAACCATGACTACTTCTTGACATATGTTGCTGTGAAAGGTGCTGGTCATGTAGCTCATTCATATAAACCTAAAGAAGTTTTCCAAGTAATAGACAGGTGGTTCTCATATGCTCTTATCTAA 1335 0.3933 MASSRSIIRNLPGFSGDLPFKLESGYIGVGEEEEVQLFYLFVESQRNPSKDPILLWFVGGPGCSAFSAFLFENGPVTIDRNSSGILPTLVLNPYAWTQVLNVMYIDLPVGTGFSYSETQEGYHSSDLLWIENTYDFLQKWFMDHPEFGSNPFYVGGGSYSTMPTVPLVQKLYEGYRAGSNPLINIKGLVLASPSTDVFLDFNSVVVFAHQLSLISDELYESIKESCNGDYVNINPDNTKCASDYEAFSRLIRYININQILEPVCISTPDLKDRILLEDSSPEGIFQSLQKVSDFWCRGYDHMLVNQWANNEDVRKALHIREGTKGEFLRCNKSLSYEVHLRSVVDYHRNFTETNLQCLVYCADLDMSVPHISTQAWIRSLNMKIEDPWRAWFVDGQVAGYTQLYKNHDYFLTYVAVKGAGHVAHSYKPKEVFQVIDRWFSYALI 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2105 444 Gene3D alpha/beta hydrolase 2 274 IPR029058 -
Alju08g2105 444 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 9 428 IPR001563 GO:0004185|GO:0006508
Alju08g2105 444 FunFam Carboxypeptidase 293 443 - -
Alju08g2105 444 Pfam Serine carboxypeptidase 12 440 IPR001563 GO:0004185|GO:0006508
Alju08g2105 444 PRINTS Carboxypeptidase C serine protease (S10) family signature 92 104 IPR001563 GO:0004185|GO:0006508
Alju08g2105 444 PRINTS Carboxypeptidase C serine protease (S10) family signature 140 165 IPR001563 GO:0004185|GO:0006508
Alju08g2105 444 PRINTS Carboxypeptidase C serine protease (S10) family signature 411 424 IPR001563 GO:0004185|GO:0006508
Alju08g2105 444 PRINTS Carboxypeptidase C serine protease (S10) family signature 105 115 IPR001563 GO:0004185|GO:0006508
Alju08g2105 444 SUPERFAMILY alpha/beta-Hydrolases 8 440 IPR029058 -
Alju08g2105 444 FunFam Serine carboxypeptidase-like 19 1 269 - -
Alju08g2105 444 Gene3D - 296 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2105 Alju-ChrAlju08 21676804 21691474 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2105 303 440 Calmodulin-binding Proteins AT2G22960 44.928 2.39e-37 133