Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2065 ATGGGCAACTGTTGCTCTCAGAGCAACGACACCGATGCCCCGGCCGAGTCCGCCACCGTCGCCAAGGTATCCACTAACAACAACTCCCAAGTAGACAGCAACAATAACAGCGGAGGAGGGGGAGGAACAGGCGGCGGCTCGGCAAAATCATCCCCTTCCCCTAATCCCCCTCCGACCAAGGCCGTGAAACCCTCCCCGATGGGCCCCGTCCTCCAACGTCCCATGGAGGACGTAAAAGCCACATATACCATGGGAAAAGAGCTAGGAAGAGGCCAATTCGGAGTCACACATCTATGCACGCACAAAGCCACCGGACAACAATACGCGTGCAAGACGATCGCAAAGAGAAAGCTCTCTAACAAAGAAGACATCGAAGATGTGAGGAGGGAGGTTCAGATCATGCACCATTTGGCCGGACAACAGAACGTGGTGGAGCTGAAGGGAGCGTATGAGGATAAACATTCGGTGCATTTGGTGATGGAGCTGTGCGCCGGCGGCGAGCTGTTTGATCGGATTATCGAGAAGGGACATTATACGGAGAGAGCGGCCGCGTCGTTAATGAGAACGATAGTGCAGATTGTTCATACTTGTCATTCCATGGGTGTTATTCATAGAGATCTGAAACCGGAGAATTTCTTGCTCTTGAATAAGAAGGAGGATTCGCCTCTTAAAGCCACCGATTTTGGATTATCCGTTTTCTTCAAAGAAGGGGAGACATTTAAGGATATTGTTGGGAGTGCATATTATATAGCTCCGGAGGTATTGAAGAGGAAATATGGGCCAGAAGTTGATATTTGGAGTATTGGTGTCATGCTCTACATTCTTCTTTGTGGTGTTCCTCCTTTTTGGGCAGAATCTGAGCATGGAATCTTCAATGCCATATTAAGAGGACACGTAGATTTTTCAGCGGATCCATGGCCATCCATATCACCATCAGCTAAAGATCTTGTTAAGAAAATGTTGACTTCTGATCCCAAGGCCAGGCTCACTGCCCACCAAGTTCTAAATCATCCATGGATTAAGGAGGATGGAGAAGCACCTGATACTCCTCTTGACAATGCTGTGCTCAATAGACTCAAACAGTTCAGAGCAATGAACCAATTCAAGAAAGCTGCTTTAAGGGTGATAGCTGGGTGCCTATCAGAGGAAGAAATAATGGGATTGAAGGAAATGTTCAAGAACATGGACACTGATGGCAGTGGAACCATTACTGTAGAAGAGCTCAAGCAAGGCCTTGCTAAACAAGGAACCAAGCTTTCTGAACTAGAAGTTAAGCAACTCATGGAAGCTGCTGATGCAGATGGAAATGGAACCATAGATTATGACGAGTTCATAACAGCAACAATGCAGATGAACCGAATGAACAAAGAAGAACATCTCTACACTGCCTTCCAATACTTTGATAAAGATAACAGCGGGTACATTACGGTTGAAGAAATGGAACAAGCTCTGAAGGACTTTAACATGCATGACGGCAGGGACATCAAAGAAATCATCTCAGAAGTTGACTCAGATAATGATGGAAGGATAAACTATGAAGAGTTTGTAGCAATGATGAGAAAAGGAAACCCAGAAGCTATGACCAGGAAGAGGCGCGATTCATTTGTTTGA 1611 0.4624 MGNCCSQSNDTDAPAESATVAKVSTNNNSQVDSNNNSGGGGGTGGGSAKSSPSPNPPPTKAVKPSPMGPVLQRPMEDVKATYTMGKELGRGQFGVTHLCTHKATGQQYACKTIAKRKLSNKEDIEDVRREVQIMHHLAGQQNVVELKGAYEDKHSVHLVMELCAGGELFDRIIEKGHYTERAAASLMRTIVQIVHTCHSMGVIHRDLKPENFLLLNKKEDSPLKATDFGLSVFFKEGETFKDIVGSAYYIAPEVLKRKYGPEVDIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHVDFSADPWPSISPSAKDLVKKMLTSDPKARLTAHQVLNHPWIKEDGEAPDTPLDNAVLNRLKQFRAMNQFKKAALRVIAGCLSEEEIMGLKEMFKNMDTDGSGTITVEELKQGLAKQGTKLSELEVKQLMEAADADGNGTIDYDEFITATMQMNRMNKEEHLYTAFQYFDKDNSGYITVEEMEQALKDFNMHDGRDIKEIISEVDSDNDGRINYEEFVAMMRKGNPEAMTRKRRDSFV 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2065 536 FunFam Calcium-dependent protein kinase 1 348 523 - -
Alju08g2065 536 FunFam Calcium-dependent protein kinase 1 84 167 - -
Alju08g2065 536 CDD STKc_CAMK 82 339 - -
Alju08g2065 536 PANTHER SERINE/THREONINE-PROTEIN KINASE 76 515 - -
Alju08g2065 536 Pfam EF-hand domain pair 457 520 IPR002048 GO:0005509
Alju08g2065 536 Pfam EF-hand domain pair 388 448 IPR002048 GO:0005509
Alju08g2065 536 ProSitePatterns EF-hand calcium-binding domain. 432 444 IPR018247 -
Alju08g2065 536 ProSiteProfiles EF-hand calcium-binding domain profile. 383 418 IPR002048 GO:0005509
Alju08g2065 536 ProSiteProfiles EF-hand calcium-binding domain profile. 455 490 IPR002048 GO:0005509
Alju08g2065 536 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Alju08g2065 536 ProSitePatterns EF-hand calcium-binding domain. 396 408 IPR018247 -
Alju08g2065 536 ProSiteProfiles EF-hand calcium-binding domain profile. 494 525 IPR002048 GO:0005509
Alju08g2065 536 ProSitePatterns EF-hand calcium-binding domain. 503 515 IPR018247 -
Alju08g2065 536 Pfam Protein kinase domain 82 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g2065 536 Gene3D - 348 523 - -
Alju08g2065 536 ProSiteProfiles Protein kinase domain profile. 82 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g2065 536 SMART efh_1 423 451 IPR002048 GO:0005509
Alju08g2065 536 SMART efh_1 387 415 IPR002048 GO:0005509
Alju08g2065 536 SMART efh_1 459 487 IPR002048 GO:0005509
Alju08g2065 536 SMART efh_1 494 522 IPR002048 GO:0005509
Alju08g2065 536 Gene3D Phosphorylase Kinase; domain 1 84 167 - -
Alju08g2065 536 SUPERFAMILY Protein kinase-like (PK-like) 59 367 IPR011009 -
Alju08g2065 536 Coils Coil 405 425 - -
Alju08g2065 536 ProSitePatterns Protein kinases ATP-binding region signature. 88 115 IPR017441 GO:0005524
Alju08g2065 536 SMART serkin_6 82 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g2065 536 MobiDBLite consensus disorder prediction 1 72 - -
Alju08g2065 536 Gene3D Transferase(Phosphotransferase) domain 1 168 347 - -
Alju08g2065 536 SUPERFAMILY EF-hand 380 520 IPR011992 -
Alju08g2065 536 FunFam calcium-dependent protein kinase 1 168 347 - -
Alju08g2065 536 ProSiteProfiles EF-hand calcium-binding domain profile. 419 454 IPR002048 GO:0005509
Alju08g2065 536 MobiDBLite consensus disorder prediction 1 50 - -
Alju08g2065 536 ProSitePatterns EF-hand calcium-binding domain. 468 480 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2065 Alju-ChrAlju08 20768610 20773071 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2065 1 533 EF-hand Containing Proteins AT5G12180 79.925 0.0 892
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Alju08g2065 Pkinase 5.6e-77 CL0016