Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2045 ATGGATTTTGTTAGCGTACGCATCACCCCCATCGACAATCCTTCACTCGCTGCCTTTGATTCCTTCTCAGGTGCCGGCGTAACCACCGTTTCCGGCGACAATGCTATTCTCCGGCGAGCAAAAAGGCCCCGGGGAAGACCTAAGGGTTCAAAGAACAAACCCAAGATAGTACCACCACCGCCCGAGACCAGATTTCTAAACTCCACAGTTGTCGGAATCCCCAATGGCGAACCCTTACCGCCACCATTCGAGACCAGATTTCTAAACGCCACAGCCGCCATCGAAATCCCCACCGGCGAACCCTCCGGCAACGCCACTGCCACCGTCGAAATCCCCGCCGGCGAACCCTCTGGCAACGACCACATCCTCCTACCAGTAAAAAGGCCCGTGGGCCGACCCAAGGGTTCAAAGAACAAGTCCAAGACAGTATCACCTCCGCTCGAGACCAGATTTCTAAACTCCACAGCCGCAGTTGAAGTCCCCGCCGGTGAACCCACCGTCAACAACCATGTACTTGGGCAAGTTAAAAGGCCCGTGGGAAGACCCAAGGGTTCAAAGAACAAGCCCAAGACAGTATCACCTCCGCTCGAGATCAGATTTCTAAACCCTACGGCCGCAGTTGAAGTCCCCGCCGGTGAATCCACCGTCAACAACCATGTACTTGGGCGAGTAAAAAGGCCCGTGGGAAGACCCAAGGGTTCAAAGAACAAGCCCAAGATAGTACAACCGCCACCCCCACCGCCACCACTCATCGAAATAAACTCAGAGATAGACATTGAAATCCCGTCGGGAGCCGACGTAGTGCAGTGGCTCCTCGAGTTTTGTCGCTACTACCAAGTCTCCCTCAAAGTTTTAAATGCCTCTGGACAACTTTCTAACATCATCCCTTATCACCACCCAAGTTCCGTCATCCTCGGACCCTTTGTGATACTGTCTCTTTCCGGTATCGTCATGTGGACCACAAACTCGGAGGAGACCATTTTTCCGTTAGAGGTTTCTCTTTCTTCGCCGGACGGTGTTGCATGCAGCGGAACGGTAGGACGGAGTGCGACGGCTGCTAGCATGGTGAAGGTGGTGGCGATCACCATGACTGCTGAGACTGATTGCTACAATCCGCCTAACAACAGTAGTGTAGAAACTGCATCGATCAGCAATGCACCGCCTCAAACTCCGAATCTTCTGTTCAATGAGTTTTACGAATCTATTAATCCCAATGATCCCATAGAAGATGGCATGCAATTGTACGATAACCTGAAAGAAAAATATGAAGAAGAACGTGATCGGATGATGAAGGAAACGAATAATGATGAGTTGATGATCGATGAGGATATCCGACGATGTGAGGAAAATCTGACACCTGCTTTAAGGGTTGAACCATATCGATTCTAA 1389 0.5112 MDFVSVRITPIDNPSLAAFDSFSGAGVTTVSGDNAILRRAKRPRGRPKGSKNKPKIVPPPPETRFLNSTVVGIPNGEPLPPPFETRFLNATAAIEIPTGEPSGNATATVEIPAGEPSGNDHILLPVKRPVGRPKGSKNKSKTVSPPLETRFLNSTAAVEVPAGEPTVNNHVLGQVKRPVGRPKGSKNKPKTVSPPLEIRFLNPTAAVEVPAGESTVNNHVLGRVKRPVGRPKGSKNKPKIVQPPPPPPPLIEINSEIDIEIPSGADVVQWLLEFCRYYQVSLKVLNASGQLSNIIPYHHPSSVILGPFVILSLSGIVMWTTNSEETIFPLEVSLSSPDGVACSGTVGRSATAASMVKVVAITMTAETDCYNPPNNSSVETASISNAPPQTPNLLFNEFYESINPNDPIEDGMQLYDNLKEKYEEERDRMMKETNNDELMIDEDIRRCEENLTPALRVEPYRF 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2045 462 Gene3D - 257 374 - -
Alju08g2045 462 MobiDBLite consensus disorder prediction 114 145 - -
Alju08g2045 462 MobiDBLite consensus disorder prediction 225 246 - -
Alju08g2045 462 SUPERFAMILY AF0104/ALDC/Ptd012-like 259 364 - -
Alju08g2045 462 CDD DUF296 259 360 IPR005175 -
Alju08g2045 462 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 223 367 IPR014476 GO:0003680
Alju08g2045 462 MobiDBLite consensus disorder prediction 176 195 - -
Alju08g2045 462 Coils Coil 408 435 - -
Alju08g2045 462 Pfam Plants and Prokaryotes Conserved (PCC) domain 259 363 IPR005175 -
Alju08g2045 462 SMART AT_hook_2 225 237 IPR017956 GO:0003677
Alju08g2045 462 SMART AT_hook_2 41 53 IPR017956 GO:0003677
Alju08g2045 462 SMART AT_hook_2 127 139 IPR017956 GO:0003677
Alju08g2045 462 SMART AT_hook_2 176 188 IPR017956 GO:0003677
Alju08g2045 462 PRINTS AT-hook-like domain signature 174 184 IPR017956 GO:0003677
Alju08g2045 462 PRINTS AT-hook-like domain signature 41 51 IPR017956 GO:0003677
Alju08g2045 462 PRINTS AT-hook-like domain signature 125 136 IPR017956 GO:0003677
Alju08g2045 462 MobiDBLite consensus disorder prediction 38 63 - -
Alju08g2045 462 ProSiteProfiles PPC domain profile profile. 251 384 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2045 Alju-ChrAlju08 20467782 20469170 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2045 215 363 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 33.929 5.37e-12 64.3