Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2044 ATGGATTTTCTAAGGGTAAGCATCACCACTATTGACAATCCCTCATTCACCGCCGGTGATTCTTTCTCCGGCGTCGGCCAACCCTCCGCCGCCAACAATTCTATTCTTCGGCCACCAAAAAGGCCCGTAGGAAGGCCGAAGGGTTCAAAGAAGAAGCCCAAGACAGTACCACCACGGCACGAGACCAGATCTCTAAACTCCACCGTCGTCCAAATCCCCATCGCCGGCAAACGTACCACTGGCAACAACGATAATCTCCGGCAAGTAAAAAGGTCCGTGGGAAGACCAAAGAAGGATTCAAAGAATAAGCCCAAGACAATACAACCACCCATTGACATACACTCACCGAGCGTCATCGAAATCCCCGCCGGTGAAAACATTGTGCAGTCGCTCCTCCAGTTTTGTCGCCGTCACCAAGTCTCCCTCAACGTGTTAAATGCCTCCGGTCATCTTTCCGACATCATTCCCTTCCACCAACCAAGCCTCTCCATCCCCGGACCCTTCCCTATACTGTCTCTTTCCGGGATCGTCAGGCCAACCCCACCACCGTTAGCTGGTGCCATAAACTCGCCGGAGAGTATTTTTCCGTTTGTGGTTTTTCTTTCTACGCCAGGCGGTGCTGTATGCGGCGGAAGGATAGGAAGCAGTGCGACGGCTGCAAGCGTGGTGAAGGTGGTGGCGACGATGACGATGGCGGTTCTTAGCAACGCGATTGAGACCTTATGA 726 0.5317 MDFLRVSITTIDNPSFTAGDSFSGVGQPSAANNSILRPPKRPVGRPKGSKKKPKTVPPRHETRSLNSTVVQIPIAGKRTTGNNDNLRQVKRSVGRPKKDSKNKPKTIQPPIDIHSPSVIEIPAGENIVQSLLQFCRRHQVSLNVLNASGHLSDIIPFHQPSLSIPGPFPILSLSGIVRPTPPPLAGAINSPESIFPFVVFLSTPGGAVCGGRIGSSATAASVVKVVATMTMAVLSNAIETL 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2044 241 CDD DUF296 116 228 IPR005175 -
Alju08g2044 241 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 88 230 IPR014476 GO:0003680
Alju08g2044 241 MobiDBLite consensus disorder prediction 60 89 - -
Alju08g2044 241 MobiDBLite consensus disorder prediction 43 57 - -
Alju08g2044 241 MobiDBLite consensus disorder prediction 14 112 - -
Alju08g2044 241 SUPERFAMILY AF0104/ALDC/Ptd012-like 114 230 - -
Alju08g2044 241 ProSiteProfiles PPC domain profile profile. 110 241 IPR005175 -
Alju08g2044 241 MobiDBLite consensus disorder prediction 14 34 - -
Alju08g2044 241 Gene3D - 117 238 - -
Alju08g2044 241 MobiDBLite consensus disorder prediction 90 105 - -
Alju08g2044 241 Pfam Plants and Prokaryotes Conserved (PCC) domain 116 228 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2044 Alju-ChrAlju08 20462973 20463698 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2044 80 227 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 32.716 4.29e-15 71.2