Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2042 ATGGGAAGACCAAAGAGTTCAAAGAACAAGCCCAGGACGCTGCCACCACCACTCGAGGCCTTTCTTGAAATCCCTGCCGTCGAAGCCATTGGCAACAACCATATTCTCCGGCAAGTAAGAAGGCCCATGGGATGGCCCAAGGGTTTAAAGAACAACCCCAAGACATCACCACCACACACATCAGAGATTGTCATCCAGATCCCTCAGGGCGCCAACATAGTGCAATGGCTCGTCCACTTCTGTTGCTGCCACCAAGTTTCAGTCACTGTGTTAAATGCCTCTGGCCAACTTGCCAACATCATCCCCTACTTCCAACCAAACTTCATCATCCCCGGACCCTTGCCCATACTGTCTCTTTCCGGCACCGTCGTCCCAACCCCATCACCCTTATCTGCTGCCACAAACTCGCAGGAGACTGTTTTTCCTTTTGTTGTTTCTCTTCCCTTGTCGGACGGTGCCCTAGTGGCGAGGAGTGCGACGGCGGCAAGCACGGTGAACGTGGTTGTGATGATGACCAAGATGCACAGTAACAACAGTAACAATGTGACGTTTCAGACAGTTTCCGACGATCAAGCTAACACCAGCAACATTGAAACTACACCAGTTAGTGATGTGCCGCCTCAGACCCAGAATCTTTTGTTCGATGACTTGCACAGATTGCTCATGGAGGATCCGATTGAATTATCTGATCAAGCTAACACCTGTAACATTGAAACTGCACCAGCTAGCGATGTACCGCCTCAGACTCAGAATCTTTCTTTCGATGACTTTCACAGATTGGTCGTAGAGGATCGGATAGAATTATATGATGAATTCCATCGACCAGTGTCATGGGAAACTGTTTAG 846 0.4929 MGRPKSSKNKPRTLPPPLEAFLEIPAVEAIGNNHILRQVRRPMGWPKGLKNNPKTSPPHTSEIVIQIPQGANIVQWLVHFCCCHQVSVTVLNASGQLANIIPYFQPNFIIPGPLPILSLSGTVVPTPSPLSAATNSQETVFPFVVSLPLSDGALVARSATAASTVNVVVMMTKMHSNNSNNVTFQTVSDDQANTSNIETTPVSDVPPQTQNLLFDDLHRLLMEDPIELSDQANTCNIETAPASDVPPQTQNLSFDDFHRLVVEDRIELYDEFHRPVSWETV 281
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2042 281 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 29 206 IPR014476 GO:0003680
Alju08g2042 281 Pfam Plants and Prokaryotes Conserved (PCC) domain 63 170 IPR005175 -
Alju08g2042 281 SUPERFAMILY AF0104/ALDC/Ptd012-like 62 169 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Alju08g2042 Alju-ChrAlju08 20438728 20439573 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2042 39 169 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 31.081 2.73e-09 55.1