Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2033 ATGGAAGAATCAGGAAAATTACAATCTGAAGAGAATAAAAGCTCTATGGAGACAAATAAGAAGAGAAAACTCAAAACACCGGCTCAGGTTTATGGTTTGGAGAAATTTTATAACGAGCACAAATATCCCACTGAGGAAATGAAATCAGAACTTGCTGAGGAGTTGGGGTTGACTGAAAAACAAGTATCTGGATGGTTTTGCCATCGAAGGTTAAAAGATAAGAGGCTGTTGAAAGATGAAGCTTGTGCTAATGGGCGGCAAGATATTTCAAGTGGCGTCGTCCAAGATCATGGAAGTGGACTAGGGCAAGATTCATGTGGAAGCACCAAACATGGTGATTATAGGCATCTTGATCCCAAAGAGGTCGAGAGTCGTGGCCTTTATGGTGGTCATGATCTTTTAGTTTCAGATATGGCCTTTGAACGTAGGAATCATTATTCTGAAAATGTTTGTGCAATGGATGACACATCATCTGAGAGCAGCTCATATTTGCAAGATAAGGATTTATATGATGCTGAGCCTTCTGGTTATACAATACCTAATGGAGCTCTTCCATCAAAAATTCCCAAGGCTGCTACGAACACGAGATATAAACCATCAGGCTATCTTAAAGTAAAAGGAGAGATTGAAAACCCTGTTATAACTGCTGTTAAGAAGCAATTAGGAAGAACTTATCGTGAAGATGGTCCGCTACTTGGTATAGAATTTGATCCACTTCCTCCTGGGGCATTCGAGTGTAAAATTGCAGATCCATTTCATGAAACATACTATATGGCAAGTCGTGCTGTTAACTGCTCTCCTGAAATTTCTGCTTTGAAAAGGCAACCCAGTCTTTCTGCTAGATATGATTCGTATAATGCCAAATTCAATTCCCAAGATTCACATATGGAAGGAGAAGACCTCACTGATTTCCAGGATAAGAAACCTCCCCAGCATTCAAAGCAAAGACCACCTTTGTACAGTCATACCTCTCGATTGCCTAGCAGAAACTCTACTCTGGATTTGTACGACCATGCTGTTAGAGAAGCACCTGCGTATAATAGCAGAGAGAATTGTAGAGTTGGCATCAAGCATGGCTTTGAAGGCTTGAAATCTGATTCTGCTTCTAATCATAGTGATCACTATGATGGTAACCTTGCAGCAAATCCAAAAGACTCACTGTTGCATGGATATGATTATGTCAATTCGAAGAATGTTCAGAGTGAATATGTAAACCTTATGCCTTCAAACCCAATCAGGAATCCTTTTGTTTCTATGGATACAAAGGATAGAGGAGGCCGATCTGGTAGGATGATAAAGGAAAATAAGTCTAGTGAAAAAAGAAAGGCAAGAAAGCCATGTGATGATCCAGACGCACTAAGGATGCGTTCGCATGAGCCTGCAAACCCTGTCGATCCACCTCTTCAATACAATGTTAAAGAAGATCATATTGCTGAGATGCAGCCACATAAATTCCTGAGATCTTCCATGGAAATGTCATCTAGCTTTAGCGAGGATGAAACTGCGAATCCCAGCTCATCTCTTGATGAAGCAATCGGTTGTCGTTAA 1548 0.4057 MEESGKLQSEENKSSMETNKKRKLKTPAQVYGLEKFYNEHKYPTEEMKSELAEELGLTEKQVSGWFCHRRLKDKRLLKDEACANGRQDISSGVVQDHGSGLGQDSCGSTKHGDYRHLDPKEVESRGLYGGHDLLVSDMAFERRNHYSENVCAMDDTSSESSSYLQDKDLYDAEPSGYTIPNGALPSKIPKAATNTRYKPSGYLKVKGEIENPVITAVKKQLGRTYREDGPLLGIEFDPLPPGAFECKIADPFHETYYMASRAVNCSPEISALKRQPSLSARYDSYNAKFNSQDSHMEGEDLTDFQDKKPPQHSKQRPPLYSHTSRLPSRNSTLDLYDHAVREAPAYNSRENCRVGIKHGFEGLKSDSASNHSDHYDGNLAANPKDSLLHGYDYVNSKNVQSEYVNLMPSNPIRNPFVSMDTKDRGGRSGRMIKENKSSEKRKARKPCDDPDALRMRSHEPANPVDPPLQYNVKEDHIAEMQPHKFLRSSMEMSSSFSEDETANPSSSLDEAIGCR 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2033 515 MobiDBLite consensus disorder prediction 290 331 - -
Alju08g2033 515 SUPERFAMILY Homeodomain-like 19 85 IPR009057 -
Alju08g2033 515 ProSiteProfiles 'Homeobox' domain profile. 16 76 IPR001356 GO:0003677
Alju08g2033 515 MobiDBLite consensus disorder prediction 414 515 - -
Alju08g2033 515 SMART HOX_1 18 80 IPR001356 GO:0003677
Alju08g2033 515 MobiDBLite consensus disorder prediction 487 508 - -
Alju08g2033 515 MobiDBLite consensus disorder prediction 1 26 - -
Alju08g2033 515 Gene3D - 8 91 - -
Alju08g2033 515 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 509 - -
Alju08g2033 515 MobiDBLite consensus disorder prediction 423 458 - -
Alju08g2033 515 MobiDBLite consensus disorder prediction 316 331 - -
Alju08g2033 515 MobiDBLite consensus disorder prediction 293 313 - -
Alju08g2033 515 CDD homeodomain 20 75 IPR001356 GO:0003677
Alju08g2033 515 Pfam Homeodomain 20 75 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2033 Alju-ChrAlju08 20294272 20298568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2033 3 509 Homeobox Transcription Factor Family AT4G03250 38.302 1.12e-81 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Alju08g2033 Homeodomain 3.6e-17 CL0123