Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2000 ATGGTATCAATGTTAGTAATGGCATGTTGTAGCGGTTCTGGGAGGCAACCGCTACCTGATGCACCTGGATTCAAGGAGTTCGAAGTTGTGAGAGGATGTAGCAGAAGGCTCCCTAGGCACTACAAAGTGTGCATGGACAATGAAGCTGTACATCCGTGTGCTCGCATCATTGATTTTGGAACGGCTAAGTTTTTGATGCCTAACTCAAATAATATAACCACATTTGCTGGAACATTTGGGTATGCCGCACCAGAGATTGCTTTTATTATGAAAGCCAATGAAAAATGTGATGTTTACAGCTTTGGAGTGTTAATTTTAGAAATTATTATGGGGCAACATCCGGTGGAGCTTATTTCATCTTTGATGGGGAATTTTGCCAATAACAATTTGTTGTTAAAAGATTTGTTGGACCCACGAGTTTTTCCACTCACAAAACCAATCCTTGATGATGTGGGCTTAGTGGCAAAAATAGCATTTTCTTGTTTGAATGAGACTCCTCAGTCTCGTCCAACCATGGAACAAGTATCTACAGAATTTGCAAGGACACCAAAGTCTTACTCAGAGGATCAATTTCACACCATCACAATTGGACAACTAATGAGTGACTGA 609 0.4072 MVSMLVMACCSGSGRQPLPDAPGFKEFEVVRGCSRRLPRHYKVCMDNEAVHPCARIIDFGTAKFLMPNSNNITTFAGTFGYAAPEIAFIMKANEKCDVYSFGVLILEIIMGQHPVELISSLMGNFANNNLLLKDLLDPRVFPLTKPILDDVGLVAKIAFSCLNETPQSRPTMEQVSTEFARTPKSYSEDQFHTITIGQLMSD 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2000 202 PANTHER LEUCINE RICH REPEAT KINASE 2 54 182 - -
Alju08g2000 202 Gene3D Transferase(Phosphotransferase) domain 1 41 197 - -
Alju08g2000 202 Pfam Protein kinase domain 54 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g2000 202 ProSiteProfiles Protein kinase domain profile. 1 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g2000 202 SMART serkin_6 6 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g2000 202 SUPERFAMILY Protein kinase-like (PK-like) 53 182 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2000 Alju-ChrAlju08 18912238 18916887 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2000 54 192 Receptor kinase-like Gene Family AT4G31110 36.486 7.73e-20 85.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Alju08g2000 Pkinase 1.9e-14 CL0016