Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1998 ATGACCTCATTCGCTGGCACCTATGGTTATGCTGCTCCAGAGATTGCTTTTACAATGCAAGCAAATGAGAAATGTGATGTTTATAGCTTTGGTGTTCTCACCTTAGAAATTCTAATGGGTAGACATCCTGGAGAGTTTATTTGTTCTTTGACAAACATTCCAACATCCTCTGATTTGCCACTTGTGGATTTCCTGGATCAGCGACTTCCTCCACCCTCAGACCTAGTTGTTGAGGAAGTGATGTTGATTGCAAAAATAACACTTTCCTGCTTGAATGAAAATCCTCCGTACCGACCCACCATGGAACAGGTATCTTTGAAACTTGTGAGGTCGAATCATTATTCAACGAACCAGTTCAAGCGCATCACACTTTGA 375 0.4187 MTSFAGTYGYAAPEIAFTMQANEKCDVYSFGVLTLEILMGRHPGEFICSLTNIPTSSDLPLVDFLDQRLPPPSDLVVEEVMLIAKITLSCLNENPPYRPTMEQVSLKLVRSNHYSTNQFKRITL 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1998 124 Gene3D Transferase(Phosphotransferase) domain 1 1 122 - -
Alju08g1998 124 PANTHER LEUCINE RICH REPEAT KINASE 2 1 112 - -
Alju08g1998 124 ProSiteProfiles Protein kinase domain profile. 1 116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g1998 124 Pfam Protein tyrosine and serine/threonine kinase 9 107 IPR001245 GO:0004672|GO:0006468
Alju08g1998 124 SUPERFAMILY Protein kinase-like (PK-like) 1 112 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1998 Alju-ChrAlju08 18793473 18793943 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1998 1 104 Receptor kinase-like Gene Family AT5G65700 38.739 5.89e-18 76.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Alju08g1998 PK_Tyr_Ser-Thr 2.2e-09 CL0016