Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1997 ATGACTTCATTTGTTGGCACCTATGGTTATGCTGCCCCAGAGATTGCTTTTACAATGCAAGCAAATGAGAAATGCGATGTTTACAGTTTTGGTGTTCTCACATTGGAAATTCTAATGGGAAGACATCCAGGAGAGTTGATTTGTTCTTTGACAGAGACTCCAACATCCTATGATTTGTTGCTTAAGGATGTGTTGGATCACCGGATACCTCTGCCCGCAATCCTAATTGCTGAAGAAGTAATGCTGATTGCAAAAATTGCACTTGCTTGTTTGAATGAAGATCCTCGGGTCCGACCAACCATGGAACAAGTATCTTTGAAACTTGTGAGGCCTAAACCTTATCCAGTGAACCAATTTGAAAACATCACATTTAGACAACTCATGAGAGCTTAA 393 0.4046 MTSFVGTYGYAAPEIAFTMQANEKCDVYSFGVLTLEILMGRHPGELICSLTETPTSYDLLLKDVLDHRIPLPAILIAEEVMLIAKIALACLNEDPRVRPTMEQVSLKLVRPKPYPVNQFENITFRQLMRA 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1997 130 PANTHER LEUCINE RICH REPEAT KINASE 2 1 112 - -
Alju08g1997 130 Gene3D Transferase(Phosphotransferase) domain 1 1 120 - -
Alju08g1997 130 ProSiteProfiles Protein kinase domain profile. 1 115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g1997 130 SUPERFAMILY Protein kinase-like (PK-like) 1 113 IPR011009 -
Alju08g1997 130 Pfam Protein kinase domain 1 104 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1997 Alju-ChrAlju08 18730305 18730789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1997 2 115 Receptor kinase-like Gene Family AT3G55550 37.705 3.84e-18 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Alju08g1997 Pkinase 2.8e-09 CL0016