Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1976 ATGAAGAACAATTGTCAGCTGAGAAACGGTGTCCGGCAGTACCACAAATCCGAGCTTCCCCGGCTCCAGTGGACGCCGGAACTCCACCGCCACTTTATTGAAGCTGTTGAAACCCTCGGTGGTCAAGATAGTAAGTTCATCAATTTCCTTTCATATATAATCAAAACTAGGTTTTTGGATTTTCCTCAAGAGGCAACACCGAAGCGAATTTTGCAGATGATGCGTGTGAAAGGATTGAGGATTTCCCACGTTAAGAGCCATCTCCAGATTTACAGAAACATTAAGAGGCATTCCATTATGTCACAAGTTCATCATTATCATGATCATCAAGCACATAAAGGAAAAGCTCATCAAGCTCGTGCTAATAATGATCTTGATCATATCGGCTCCATTTGCTTACCCCGAAGATCGTCAGGAGCAAAAGTTTTAACGACAAAATATAACAATAGTGTGAAGAGAGAACTACATCCATTGGGTATCAAAGGGCTTTCGCAAAGTAGTGAAGAATTTTACTATGATCTCAATCAGGAGCCTTATGCAACGACAAGTACAGATAATAGTGGGACTGCTCCATTTGGTGACCATTCATTCTCTTTTGATCACACACATCTGCTTCCAGTAAACATCATGCACAGTGTGCAAGAGGAAGAAGACGGCCATGGCGGCGATGACGAAAATGAAGAAGAACAAGTCGTTCATGACTCTACTAGTTCAACACAGTCGCTTGGAGGGAATTACATAAACTTAGACCTAACTATTTGA 762 0.4186 MKNNCQLRNGVRQYHKSELPRLQWTPELHRHFIEAVETLGGQDSKFINFLSYIIKTRFLDFPQEATPKRILQMMRVKGLRISHVKSHLQIYRNIKRHSIMSQVHHYHDHQAHKGKAHQARANNDLDHIGSICLPRRSSGAKVLTTKYNNSVKRELHPLGIKGLSQSSEEFYYDLNQEPYATTSTDNSGTAPFGDHSFSFDHTHLLPVNIMHSVQEEEDGHGGDDENEEEQVVHDSTSSTQSLGGNYINLDLTI 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1976 253 MobiDBLite consensus disorder prediction 214 253 - -
Alju08g1976 253 SUPERFAMILY Homeodomain-like 20 95 IPR009057 -
Alju08g1976 253 NCBIfam myb-like DNA-binding domain, SHAQKYF class 57 94 IPR006447 GO:0003677
Alju08g1976 253 Gene3D - 19 96 - -
Alju08g1976 253 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 9 122 IPR046955 GO:0003700
Alju08g1976 253 MobiDBLite consensus disorder prediction 233 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1976 Alju-ChrAlju08 18123574 18131557 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1976 6 95 G2-like Transcription Factor Family AT2G42660 47.778 4.03e-21 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju08g1976 None None None