Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1967 ATGGCTGCTTGCAACAACAAGAAGAAGGTTGTGTTCATCATGGGATCAACAGGCACAGGAAAAACCAAGCTTTCAATCGACTTAGGCTCACACTTCCCTTCTGAGATCATCAACGCTGACAAGATCCAAGTTTACAAAGGTTTGGACATCATCACAAATAAGATCCCAGAATCTGAGCGACGAGGAATCCCCCACCACCTCCTTGGAATCATCGAAGATCCTGAATTTGACTTCACTACTGACCATTTTTGCGATCACGTCATCGCTGCAGTCGATCATATCACCCAACAAGGAAACCTCCCCATGATCGTCGGAGGCTCAAATACGTACCTCGAATTCCTAGTGGAACATCCCACCTTGGACTTCCGTTCCAAGTATGATATTTGCTTCCTCTGGCTATACGTGTCTGTTGATGTCCTCTTTCCCTATCTGGACAAAAGGGTTGATGAAATGCTGGAGGCGGGCTTTGTGGATGAGACGAGAGAGTTCTACCTACCTGGGGCTGATTATTCGGCTGGAATCAGAAGAGCCATTGGTGCTCCCGAATTGGACGAGTATTTTAAGGTTGAGAATGATGTTAATGTCGACAATGATCACAAGCAAGAGCTGCTCAAAGATGCTATTAAGAGAATGAAAGGCAACACTCGTACGCTGGCTCAAGGGCAACTTTCAAAGATACATCGCCTCAATGATGAGCTTGGTTGGGGACTGAATCGTATTGATGCTACTAAGGTATTTGAGGCTGTTTTAAAGGGAAGTGCATATCAGAGTTTGTGGGAAGACATGGTTTTTAAGCCAAGCAAGGAGATTGTTCAGAGCTTCCTTCAAGGCCAAAACAATGCAAGTGACGGGAAAGCTACTAAATAA 867 0.451 MAACNNKKKVVFIMGSTGTGKTKLSIDLGSHFPSEIINADKIQVYKGLDIITNKIPESERRGIPHHLLGIIEDPEFDFTTDHFCDHVIAAVDHITQQGNLPMIVGGSNTYLEFLVEHPTLDFRSKYDICFLWLYVSVDVLFPYLDKRVDEMLEAGFVDETREFYLPGADYSAGIRRAIGAPELDEYFKVENDVNVDNDHKQELLKDAIKRMKGNTRTLAQGQLSKIHRLNDELGWGLNRIDATKVFEAVLKGSAYQSLWEDMVFKPSKEIVQSFLQGQNNASDGKATK 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1967 288 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 210 IPR027417 -
Alju08g1967 288 FunFam Adenylate isopentenyltransferase 5, chloroplastic 137 237 - -
Alju08g1967 288 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 7 275 IPR039657 -
Alju08g1967 288 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 137 237 - -
Alju08g1967 288 Gene3D - 7 275 IPR027417 -
Alju08g1967 288 Pfam IPP transferase 43 117 - -
Alju08g1967 288 Pfam IPP transferase 123 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1967 Alju-ChrAlju08 17780921 17781787 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1967 124 281 C2H2 Transcription Factor Family AT2G27760 32.240 4.87e-22 93.6