Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1939 ATGTCGACCAATAGTTCTTTGAATGTGCAGCTGTCTAAGAAGATGACATTTTTGGGTTTGAAACTATGGGTCTTAATTGGGATAGGTGTGGGTGCATTTATAGTCCTGATTCTTTGTATATTGTCCATATGGGCTTTGTTTTGGAGAAAATCAAAGAGACTGCTGAACAAAGACACTACTGCATCACAAATACCAAATGTGTCGAAAGAGATCAAGGTCGATAAGGTAGGAGTGCAGAGTTCTTATAATCACCCAGGAAGTGTATATGTTCACTTTCATGAGAAGGCAAGTGATAAGAATCCGGATAAGGTCTTAGTTCAGTCAGGCATGAGCAAATCCAGTGATCCGGACAATATTAGTCAGTGTAGTTCAATATATCATCACGAGAGAGGAGGTAGTTCGATGTCGGGCGAGGATGGGAGCTCTGGGACCTTCAGGAAGCAATCTGCATTCTCATATGGTGGCATGGTGACTGCCTCTCCTTTAATTGGTTTGCCAGAATTTTCTCATCTTGGGTGGGGCCACTGGTTTACGCTTAGGGATCTTGAACTTGCAACAAACCGGTTCTCGGCAGAGAATGTGACTGGTGAGGGTGGATATGGGGTTGTTTACCGGGGAATGTTGATCAATGGGACCGAGGTGGCAGTGAAGAAAATTCTTAATAACTTGGGACAAGCAGAGAAAGAGTTCAGGGTTGAAGTGGAAGCTATAGGCCATGTTCGTCATAAGAATCTTGTACGCTTGCTTGGATACTGCGTTGAAGGAGTTCACAGGATGCTTGTGTATGAGTATGTGAATAATGGTAACTTAGAGCAATGGTTACATGGGGCCATGCGCCAGCGTGGGACACTTACCTGGGAGGCCCGCATGAAAGTTATAACTGGTACAGCGAAAGCGCTTTCATACTTGCATGAAGGGATAGAACCGAAAGTTGTTCATCGTGACATAAAATCTAGCAACATATTAATCGATGATCAGTTCAATGCGAAGGTTTCTGACTTCGGCTTGGCCAAGCTCTTGGGTTCAGGAGAAAGTCACATAACAACTAGAGTCATGGGAACATTTGGTTATGTGGCACCTGAGTATGCCAATACTGGTTTGTTAAATGAGAAGAGCGATGTTTACAGCTTCGGTGTTCTACTTCTTGAAGCCGTTACTGGAAGGGACCCGGTAGACTATGCACGTCCCACTAATGAGGTTAATCTTGTTGAATGGCTCAAGCTTATGGTCAGTGCTAGAAGAGCTGAGGAAGTCATAGACCCGAGCCTTGAGGTTAAACCGTCGACACGGGAATTAAAACGCGCCCTTCTGGTTGCACTTAGGTGTCTTGATCCTGCTGCAGAAAAGAGGCCCAAAATGAGTCAGGTTGTGAGGATGTTTGAAGCTGACGAAAATCCATTCCGAGAGGATCGAAGGAACCGAAAGTGCCACATTGCCAGCATGGAAATTGAAACCACGAAGGATCTTTCTGGTGGACCTTATGCTGAGAAATATGGGGATTCTGAAAGCCATAAGCCAGAGGCAACTCTTAAGAGTATGATTGACAGTTATGATAACTTGGCCTAG 1566 0.447 MSTNSSLNVQLSKKMTFLGLKLWVLIGIGVGAFIVLILCILSIWALFWRKSKRLLNKDTTASQIPNVSKEIKVDKVGVQSSYNHPGSVYVHFHEKASDKNPDKVLVQSGMSKSSDPDNISQCSSIYHHERGGSSMSGEDGSSGTFRKQSAFSYGGMVTASPLIGLPEFSHLGWGHWFTLRDLELATNRFSAENVTGEGGYGVVYRGMLINGTEVAVKKILNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCVEGVHRMLVYEYVNNGNLEQWLHGAMRQRGTLTWEARMKVITGTAKALSYLHEGIEPKVVHRDIKSSNILIDDQFNAKVSDFGLAKLLGSGESHITTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVLLLEAVTGRDPVDYARPTNEVNLVEWLKLMVSARRAEEVIDPSLEVKPSTRELKRALLVALRCLDPAAEKRPKMSQVVRMFEADENPFREDRRNRKCHIASMEIETTKDLSGGPYAEKYGDSESHKPEATLKSMIDSYDNLA 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1939 521 FunFam Putative receptor-like serine/threonine-protein kinase 265 475 - -
Alju08g1939 521 SMART serkin_6 189 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g1939 521 Gene3D Transferase(Phosphotransferase) domain 1 265 478 - -
Alju08g1939 521 MobiDBLite consensus disorder prediction 482 521 - -
Alju08g1939 521 ProSiteProfiles Protein kinase domain profile. 189 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g1939 521 Pfam Protein kinase domain 192 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g1939 521 SUPERFAMILY Protein kinase-like (PK-like) 173 463 IPR011009 -
Alju08g1939 521 PANTHER OS01G0323000 PROTEIN 1 482 - -
Alju08g1939 521 FunFam Putative receptor-like protein kinase 171 264 - -
Alju08g1939 521 Gene3D Phosphorylase Kinase; domain 1 171 264 - -
Alju08g1939 521 ProSitePatterns Serine/Threonine protein kinases active-site signature. 311 323 IPR008271 GO:0004672|GO:0006468
Alju08g1939 521 CDD STKc_IRAK 196 461 - -
Alju08g1939 521 Coils Coil 209 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1939 Alju-ChrAlju08 17381768 17384811 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1939 19 463 Trihelix Transcription Factor Family AT1G70460 38.222 7.95e-92 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Alju08g1939 Pkinase 1.1e-47 CL0016