Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1935 ATGCCAGCATCAATTGTTACGCCCAAATTGAGCATCCTTGGTGTAATTCTCAATGCCGCTACATCCTACCCGTCCTCACTGTCGGTATCATCCTCGCCTCCACCTCCGCCGTTGTTAGAGGAAGTTGTCTTGGCTGTGTCATTGGAGAAGAGGATAGAGAAGATGATTTTTATACAAACCCAGGTTTTGAACCCAAAATGCAGATATACCATGGATGAACCTTTTCTTCCCAGGAAACGAGGAGTGGTTGCAGAATCATCAAGCAGGCCACCATCCCTAAGAGAACTTAACCCATCTTATATTGATCTTATCACCAATGAAGAAATCATTCAGATCATTACCACACCCAAGAATAGCCCTTCGTATTTGAACCTCATAGCCAACTTGAACAGAAGAAAGAATATAGTCCATCGCTCACATTCTGCTCCCTCAGTTTTCACTGATGTCAAAAGAGATGGTCACGATTCCTTTGACCTCAGGATTTCACAAAAATCATCACCTGCAATAGTAAGGCTATCCTTTATTGGTGTCATCTTGTATGTGGCAACTGGGGTTTTAGTGTACTTGGTAAGTGGGAATTTCAAGGGCAAATCCACTTACAAGCCTGTGGATGCTGTGTACTTCACAGTGGTAACTCTCTGTACAATAGGGTACGGTGATATTGTCCCAAACACAGCATTTACCAAAATCTTTACCTGTGGGTTCATTCTGGTGGGTTTCGGATTTGTCGGCATCCTGATGAATGGCTTGGTCACCTACATTTGTGATAGACAAGAGGAAATGTTACTGAGTGCCATGGATGAGAATAGGTTCAATACACTTGTTAGATCATATATGATAGACAAAGAGAAAGGGAGAATGAGGATAAGGACCAAAGTGTGTCTAGCTTTGGCAGTGGTTGTTTGTTGCATTGCTATAGGAACAATTTGTGCTCACTTCCTTGAGAGCTTAGATTGGCTGGACAGTTTTTATCTCTCTGTTACTTCTGTTACAACTGTGGGTTATGGGGATTATGCTTTTACTACTGAGATGGGAAGGTGTTTTGCATCTTTATGGCTCTTAGTAAGCACATTGGCAGTCGGCAGGGCCTTCCTGTACCTAACTGAATACAGTATTGACAAGAGAAATCGTACTATTGCAAAATGGATTCTTCACAAGAAGATTACCTTGTCAGATTTAGTGGCCGCTGACCTCGACAATGATGGATCAATCAGCAAGTCTGAATTTGTCATATATAAGCTTAAGGAGATGGGGAAGATAACTGAGAATGACATTCTACAAATTGGCAGGCAATTTGACTCGTTGGACAGTGGCCAATGTGGCAAGATTACTCTTGCTGACCTAATGGAAACTGCCTAA 1359 0.4224 MPASIVTPKLSILGVILNAATSYPSSLSVSSSPPPPPLLEEVVLAVSLEKRIEKMIFIQTQVLNPKCRYTMDEPFLPRKRGVVAESSSRPPSLRELNPSYIDLITNEEIIQIITTPKNSPSYLNLIANLNRRKNIVHRSHSAPSVFTDVKRDGHDSFDLRISQKSSPAIVRLSFIGVILYVATGVLVYLVSGNFKGKSTYKPVDAVYFTVVTLCTIGYGDIVPNTAFTKIFTCGFILVGFGFVGILMNGLVTYICDRQEEMLLSAMDENRFNTLVRSYMIDKEKGRMRIRTKVCLALAVVVCCIAIGTICAHFLESLDWLDSFYLSVTSVTTVGYGDYAFTTEMGRCFASLWLLVSTLAVGRAFLYLTEYSIDKRNRTIAKWILHKKITLSDLVAADLDNDGSISKSEFVIYKLKEMGKITENDILQIGRQFDSLDSGQCGKITLADLMETA 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1935 452 Pfam Ion channel 177 253 IPR013099 -
Alju08g1935 452 Pfam Ion channel 299 368 IPR013099 -
Alju08g1935 452 PRINTS Two pore domain K+ channel signature 211 239 IPR003280 GO:0005267|GO:0016020|GO:0071805
Alju08g1935 452 PRINTS Two pore domain K+ channel signature 331 340 IPR003280 GO:0005267|GO:0016020|GO:0071805
Alju08g1935 452 FunFam Two-pore potassium channel 2-like 168 264 - -
Alju08g1935 452 SUPERFAMILY EF-hand 395 450 IPR011992 -
Alju08g1935 452 ProSitePatterns EF-hand calcium-binding domain. 397 409 IPR018247 -
Alju08g1935 452 SUPERFAMILY Voltage-gated potassium channels 281 388 - -
Alju08g1935 452 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 200 426 IPR003280 GO:0005267|GO:0016020|GO:0071805
Alju08g1935 452 Gene3D - 278 387 - -
Alju08g1935 452 Gene3D - 156 276 - -
Alju08g1935 452 FunFam Two-pore potassium channel 3 276 390 - -
Alju08g1935 452 SUPERFAMILY Voltage-gated potassium channels 165 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1935 Alju-ChrAlju08 17364404 17367460 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1935 134 450 Ion Channels AT4G18160 52.516 4.13e-110 330