LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju08g1932	ATGTCTAGCCCGCTTAAAGTGCTTAGTGCACTTGATGTTGCCAAGACACAATGGTACCACTTCACAGCCATCCTAATTGCTGGCATGGGCTTCCTCACTGACGCCTATGATTTCTTCAGTTTATCAAACATCACCAAGTTGCTTGGACGCATCTACTACACCCACGACGGTGCGCCGAAGCCCGGAACCCTTCCTCCCGTCGTGAATTCTGCTCTCTACGGTGTTGCCTTAATTGGCGCCTTAATAGGTCAGCTTTTCTTTGGATGGCTGGGTGACAAAATTGGCAGAAAAAAGGTCTATGGTGTAACCCTTATTCTCATGGTTTTCTCCTCTCTGGCCTCCGGTCTCTCTTTCGGTAAATCCGCGAAAAGCATCATCACCACTCTCTGCTTCTTCCGCTTCTGGCTTGGATTCGGCATAGGAGGCGACTACCCTCTCTCTGCAACCATCATGTCAGAATATTCCAACAAAAAGACTCGTGGTGCTTTCATCGCGGCGGTTTTTGCCATGCAAGGCTTCGGAATTCTGCTCAGCGGTGTTGTTTCCCTAATCGTTGCAGCCGCGTTTAATCATGCCTACAAAGCTCCTGCTTATAATAAGGACAACCCTTGGGCTTCTCTTGTACCCCAAGCCGACTATGTATGGCGAATCATTCTAATGTTTGGTGCTCTACCAGCTGCTATCACTTACTACTGGCGTATGAAAATGCCGGAGACGGCTCGTTATACAGTGCTCATCGCTAAGAACGCGAAGCAAGCAGCGCAAGACATGGCTAAAGTACTGCAAGTTGATATTGAAGCTGAACCAGAAAAAGTAGAGAAGATGACTCAGAGAAAGAACAAATATGGGTTGTTCAGTAGGGAATTTGCTCGCAGGCATGGTCTTCACTTGCTTGGAACCACCACCACTTGGTTTCTATTAGATATTGCGTACTACAGTAATACTCTTTTTCAGAAAGATATTTACACTGCAGTTAAGTGGCTTCCACAACCAGAAGAGATGAACGCAATCTATGAGGTTTACAGGGTTGCGGGAGCAACAACGCTTATAACATTATGTGGTACAGTGCCTGGTTATTGGTTTACTGTGGCTTTCATAGACTATCTCGGTCGCTTCTACATCCAACTCATGGGCTTCTTCTTCATGACGGTCTTCATGTTTGCGCTTGCAATCCCATACAACCACTGGATCAAAGAAGAAAACCGAAACGGATTTCTTGCACTGTATTCACTCACCTTCTTCTTCGCCAACTTCGGCCCGAATTCCACCACTTTCATTGTCCCTGCGGAGATTTTCCCGGCAAGGTTGAGGTCCACTTGCCATGGGATATCTGCAGCTGCCGGAAAAGCTGGAGCCACCATCGGCGCAATCGGGTTTTTGTTTGTAGCACAGAGCACGGACCCTGATGAGAGAGATGTTGGGTATCCTGCTGGCCTTGGGGTGAAGAAAGCGCTTATTATTCTTGGTGTGATCAATTTTGTTGGAATGCTATTTACATTCCTCTTGCCGGAGTCGAAAGGTAAATCATTGGAGGAGTTAAGCGGAGAGAACGAAGGCGAAGGCGAAGGCGAAAGAGGCGATCAGGCTACATAG	1593	0.4739	MSSPLKVLSALDVAKTQWYHFTAILIAGMGFLTDAYDFFSLSNITKLLGRIYYTHDGAPKPGTLPPVVNSALYGVALIGALIGQLFFGWLGDKIGRKKVYGVTLILMVFSSLASGLSFGKSAKSIITTLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILLSGVVSLIVAAAFNHAYKAPAYNKDNPWASLVPQADYVWRIILMFGALPAAITYYWRMKMPETARYTVLIAKNAKQAAQDMAKVLQVDIEAEPEKVEKMTQRKNKYGLFSREFARRHGLHLLGTTTTWFLLDIAYYSNTLFQKDIYTAVKWLPQPEEMNAIYEVYRVAGATTLITLCGTVPGYWFTVAFIDYLGRFYIQLMGFFFMTVFMFALAIPYNHWIKEENRNGFLALYSLTFFFANFGPNSTTFIVPAEIFPARLRSTCHGISAAAGKAGATIGAIGFLFVAQSTDPDERDVGYPAGLGVKKALIILGVINFVGMLFTFLLPESKGKSLEELSGENEGEGEGERGDQAT	530

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju08g1932	530	FunFam	Inorganic phosphate transporter 1-6	19	528	-	-
	Alju08g1932	530	CDD	MFS_PhT	24	506	-	-
	Alju08g1932	530	PANTHER	SOLUTE CARRIER FAMILY 22 MEMBER	20	511	-	-
	Alju08g1932	530	SUPERFAMILY	MFS general substrate transporter	11	514	IPR036259	-
	Alju08g1932	530	MobiDBLite	consensus disorder prediction	511	530	-	-
	Alju08g1932	530	Gene3D	MFS general substrate transporter like domains	19	529	IPR036259	-
	Alju08g1932	530	NCBIfam	phosphate:H+ symporter	10	516	IPR004738	GO:0005315\|GO:0006817\|GO:0016020
	Alju08g1932	530	ProSiteProfiles	Major facilitator superfamily (MFS) profile.	23	507	IPR020846	GO:0022857
	Alju08g1932	530	Pfam	Sugar (and other) transporter	27	513	IPR005828	GO:0016020\|GO:0022857\|GO:0055085

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju08g1932	Alju-ChrAlju08	17328246	17330211	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju08g1932	6	524	Inorganic Solute Cotransporters	AT2G32830	72.361	0.0	791