Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1918 ATGGAGAGGGATCATCAAGAACAAGATCATAAGGTGACCATGATGAATGAAACTAGGCCAAGCATTAATGATGTCCCAAAAGCTGTTTCTCCGGTCTCATTCGCAGCTGATCACGAGGATCAAACCGTCCGGAGACCTCGTGGCCGGCCGGCGGGGTCCAAGAACAAGCCGAAGCCGCCCATTATCGTGACAAGGGACAGTGCAAATGCCCTAAGAGCTCATGCCCTAGAAGTCACATCAGGGTGTGACATCAATGAAAGTTTGGTCAACTTTGCAAGAAGGAAGCAGAGAGGGATTTGCATACTCAGTGGAACTGGTTGTGTCACAAATGTAACACTTCGTCAACTAGCTTCTTCAGGTGCAACTGTAACTCTCCATGGTAGGTTTGAGATTCTCTCTCTTCTCGGGTCAATCCTGCCACCACCGGCTCCACCGGGGATCACCGGGCTGACCATTTACCTCGCCGGGGCTCAAGGGCAGGTTGTGGGCGGAGCTGTGGTGGGAGCTCTGGTTGCTTCAGGTTCTGTGGTGATTATGGCTGCTTCGTTCATGAATGCTACTTTTGATCGTCTTCCATTAATGGAGGACGACGAGATTACTCAGAACCAGAATCAGCATTATCATCATCAGAATGGTCGAAGCCATAATCATCATCTTCATCATCATCTTCACCACCTTGATGCTTCAGATTTGTTTGGAATGCCTCAAAACTTACTCACTAATGGCTCAATCCCTCCTGAGATATACTCATGGAGTACTACTCCTGGCCGTAACTTCTCAAAAGCCTGA 789 0.488 MERDHQEQDHKVTMMNETRPSINDVPKAVSPVSFAADHEDQTVRRPRGRPAGSKNKPKPPIIVTRDSANALRAHALEVTSGCDINESLVNFARRKQRGICILSGTGCVTNVTLRQLASSGATVTLHGRFEILSLLGSILPPPAPPGITGLTIYLAGAQGQVVGGAVVGALVASGSVVIMAASFMNATFDRLPLMEDDEITQNQNQHYHHQNGRSHNHHLHHHLHHLDASDLFGMPQNLLTNGSIPPEIYSWSTTPGRNFSKA 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1918 262 Gene3D - 70 222 - -
Alju08g1918 262 FunFam AT-hook motif nuclear-localized protein 71 199 - -
Alju08g1918 262 Pfam Plants and Prokaryotes Conserved (PCC) domain 72 184 IPR005175 -
Alju08g1918 262 PIRSF ESCAROLA 1 261 IPR014476 GO:0003680
Alju08g1918 262 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 19 216 IPR014476 GO:0003680
Alju08g1918 262 SUPERFAMILY AF0104/ALDC/Ptd012-like 68 194 - -
Alju08g1918 262 CDD DUF296 72 154 IPR005175 -
Alju08g1918 262 MobiDBLite consensus disorder prediction 1 61 - -
Alju08g1918 262 ProSiteProfiles PPC domain profile profile. 68 207 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1918 Alju-ChrAlju08 17137234 17138022 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1918 8 251 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 66.803 2.65e-98 286