Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1908 ATGGCTGTGGCAATCCCAGCAGCCGCACCTTCCACTACTGTCGAAAAAGTGAGCCCCATTACGGTGCAACAAGCCGTTGATGCTCTCTTCAAATGGAAGAATTCAAAGTCTGAGATCGAGAAACCAAAGCTATTTGACTTGGACGATGAATTCGTCTACCTCGTTCTCACCCTCAACAAACTTCCTCCCAAGTCTCGCGTTAATGCCCACAAGATCCCACTTCCGCATTCTCTTCTCTCTGAGTTCTCCGAGCGCTGTTTGATCATCGATGACAGACCTAAGTCGAAACTTACCAAAGAGGATGTGCAGAAGAAGATCAAATCGGAGAATATTCCAGTTTCTAAAGTTATTAAGCTTTCGAAGCTTCAGTCTAATTATCGCCCCTTCGAGGCTAAGCGGAAGCTCTGTGGTTCTTACCACATGTTTTTCGCTGATAAAGGGGTTATTCCTCTGCTACCACGGCTGTTGGGTAAGCAATTCTTTAAGAAGAAGAAGATTCCTGTGCCGGTGGATTTGAAGAACAAAAATTGGAAGGAGCAGATTGAGAGGGCTTGCTCGTCGGCGTTCTTGTTCCTCAGGACAGGTACGTGTAGTGTGGTGAGAGTTGCCAAAGTGTCAATGGAAAGTGACGAGATTGTTGCTAATGTGACTGCGGCTATCAATGGTATTGTCGAGCTTTTGCCCAAAGGTTGGGGTTCTGTACGGTCTTTTCATTTGAAATTATTGGATTCGCTTGCGTTGCCGCTTTATCAGGTAATTCCTGATATGAAATTGAAGATTGAGGGAGTTAAGAGCATAGAGGAAGTTAAGGAAGAGGATGGAGATATTGTGAAAGATGAGGCTAAGAAGGATCTTAAAGTTGTTAAGAAGAAGGGGAGGATACATGAAGTTCGGTACATGGATGATAATGTAGGTCATGAATTCAGTCAAGATGAGTCAGGTGTTGAGGAAGGTGGGGATTTAGAAAAAGATGATGATGATGAAATGACTGTTGAACCAGTGGTAGATAAGAAGAAGAGGAAAGGATCAAAATCTGACAAAGAGGTTCTTAGTGAGGTGAATAGTGAGAAAAAATTGAAGAAGGCCACCAAGAACGAGGACAAAAGTAAGAAAGATGGGTTGTCTTCTAAGAGAAAGAAGGAAAATGATTTACCTGGTATAGATGAAACTTCTGGCAAGAGGAAGAAGAAGAAGGAAAGTGGAGAAGTGAAAGTAAAAGCTAAGAAAATTAAGAAGGCTGCTTCTGCTGAGTAA 1254 0.4274 MAVAIPAAAPSTTVEKVSPITVQQAVDALFKWKNSKSEIEKPKLFDLDDEFVYLVLTLNKLPPKSRVNAHKIPLPHSLLSEFSERCLIIDDRPKSKLTKEDVQKKIKSENIPVSKVIKLSKLQSNYRPFEAKRKLCGSYHMFFADKGVIPLLPRLLGKQFFKKKKIPVPVDLKNKNWKEQIERACSSAFLFLRTGTCSVVRVAKVSMESDEIVANVTAAINGIVELLPKGWGSVRSFHLKLLDSLALPLYQVIPDMKLKIEGVKSIEEVKEEDGDIVKDEAKKDLKVVKKKGRIHEVRYMDDNVGHEFSQDESGVEEGGDLEKDDDDEMTVEPVVDKKKRKGSKSDKEVLSEVNSEKKLKKATKNEDKSKKDGLSSKRKKENDLPGIDETSGKRKKKKESGEVKVKAKKIKKAASAE 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1908 417 CDD Ribosomal_L1 22 249 IPR028364 -
Alju08g1908 417 Gene3D - 95 187 IPR016095 -
Alju08g1908 417 MobiDBLite consensus disorder prediction 330 417 - -
Alju08g1908 417 SUPERFAMILY Ribosomal protein L1 48 250 IPR023674 -
Alju08g1908 417 MobiDBLite consensus disorder prediction 302 417 - -
Alju08g1908 417 Pfam Ribosomal protein L1p/L10e family 41 244 IPR028364 -
Alju08g1908 417 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 25 244 - -
Alju08g1908 417 FunFam Ribosomal protein L1p/L10e family 95 186 - -
Alju08g1908 417 MobiDBLite consensus disorder prediction 314 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1908 Alju-ChrAlju08 16851102 16852355 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1908 138 240 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 33.981 1.03e-11 62.4