Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1890 ATGGACGACGCCAACAAGTCCCAAGGTCGCTTCAAGCTGGGCCGGCAATCCTCTAAGGCGCCCGAACGCCGCCACTCCGGCGATGACATTGGCTCGGAGGGGTTGGACTCGAGCGTGAGGCTGATGTACTTGGCCAACGACGGGGATTTGGATGGAATCAAGGAGCTCTTGGACTCTGGAACTGATGTCAATTTCAGAGATATTGATGGCCGCACCGCTTTGCATGTTGCCGCTTGTCAGGGTCTTACCGATATCGTTGAATTGTTAATCCGAAGGGGTGCTGAGGTCGATCCAAAGGACCGTTGGGGCAGCACGCCTTTAGCAGATGCAATATACTACAAAAACCATGATGTTGTAAAACTTTTGGAGAAACATGGAGCAAAACTTCCGATGGCTCCTATGCATGTCCAAAATGTTCGTGAAGTTCCAGAATATGAGATTAACCCTTCTGAACTTGATTTTACAAATAGTGTTCGCATAACAAAGGGAACTTTTCGTGATGCATTTTGGCGTGGCACTCATGTTGCTGTCAAGACACTTGGGGAGGAAGTGTTAGCGGATGATAACAAAGTAAAAGCATTTCATGATGAGCTCACCTTACTTCAAAAAATAAGGCATCCAAATGTAGTCCAATTTTTAGGTGCTGTAACACAGAGCACCCCAATGATGATTGTCACAGAATATCTACCTTGGGGAGATTTTCGTGCCTACTTGAAAAGGAGAGGTGCATTAAAACCAATAACAGCTGTGAAGTTTGCACTTGACATTGCAAGGGGAATGAACTATTTGCATGAACATAAACCAGAAGCAATTGTACACCGAGATCTTGAACCTTCAAATATACTGCGGGATGATTATGGGCATCTGAAAGTTGCAGACTTTGGGGTTAGCAAGTTACTAGAAGTTGCAAAAACTGTCAAAGAAGACAATCCTGTGGCTAGCGATACTTCTTGGAGATATGTTGCTCCAGAGGTCTATAAAAATGAGGAGTATGATACCAAAGTAGATGTCTTTTCATTCGGTCTAATATTAGAGGAGATGATTGAAGGTTGTCCACCATTGCATTCAATGCCGGAAAAAGAAGTTCCTAAAGCATATGTTGCAAATCAGCGCCCACAGTTCAAGGCTTCTTCTAGGGTTTATGCACATGGACTAAAAGAGTTAATTGAGGAATGTTGGGATAAAGAATCACACAGAAGACCTACATTTGGACAAATAATTGTGAGATTGGAAAGCATCCACCGCCGTCTTGCTAACGAAAGGCGCTGGGAGGAGTGTGACTATACATGCTTCCCAAAACTGAGGGCTTTGTTTCGACGAAATCAGACGAATCCAGGAAGCCGATCATCTCGGTTGATGAATTACTAG 1368 0.4423 MDDANKSQGRFKLGRQSSKAPERRHSGDDIGSEGLDSSVRLMYLANDGDLDGIKELLDSGTDVNFRDIDGRTALHVAACQGLTDIVELLIRRGAEVDPKDRWGSTPLADAIYYKNHDVVKLLEKHGAKLPMAPMHVQNVREVPEYEINPSELDFTNSVRITKGTFRDAFWRGTHVAVKTLGEEVLADDNKVKAFHDELTLLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPWGDFRAYLKRRGALKPITAVKFALDIARGMNYLHEHKPEAIVHRDLEPSNILRDDYGHLKVADFGVSKLLEVAKTVKEDNPVASDTSWRYVAPEVYKNEEYDTKVDVFSFGLILEEMIEGCPPLHSMPEKEVPKAYVANQRPQFKASSRVYAHGLKELIEECWDKESHRRPTFGQIIVRLESIHRRLANERRWEECDYTCFPKLRALFRRNQTNPGSRSSRLMNY 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1890 455 FunFam Integrin-linked protein kinase family 21 145 - -
Alju08g1890 455 MobiDBLite consensus disorder prediction 16 31 - -
Alju08g1890 455 FunFam Os01g0748600 protein 140 430 - -
Alju08g1890 455 MobiDBLite consensus disorder prediction 1 33 - -
Alju08g1890 455 PIRSF ILK 2 432 - -
Alju08g1890 455 Pfam Protein tyrosine and serine/threonine kinase 160 409 IPR001245 GO:0004672|GO:0006468
Alju08g1890 455 SMART ANK_2a 36 65 IPR002110 GO:0005515
Alju08g1890 455 SMART ANK_2a 102 131 IPR002110 GO:0005515
Alju08g1890 455 SMART ANK_2a 69 98 IPR002110 GO:0005515
Alju08g1890 455 ProSiteProfiles Ankyrin repeat profile. 69 101 IPR002110 GO:0005515
Alju08g1890 455 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 117 416 - -
Alju08g1890 455 Gene3D - 34 140 IPR036770 -
Alju08g1890 455 ProSiteProfiles Protein kinase domain profile. 154 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g1890 455 Gene3D Transferase(Phosphotransferase) domain 1 141 419 - -
Alju08g1890 455 SUPERFAMILY Protein kinase-like (PK-like) 160 416 IPR011009 -
Alju08g1890 455 FunFam serine/threonine-protein kinase STY46-like 147 230 - -
Alju08g1890 455 ProSiteProfiles Ankyrin repeat region circular profile. 69 101 - -
Alju08g1890 455 SUPERFAMILY Ankyrin repeat 40 132 IPR036770 -
Alju08g1890 455 Pfam Ankyrin repeats (3 copies) 41 129 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1890 Alju-ChrAlju08 16532106 16537702 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1890 8 426 MAP Kinase Kinase Kinase AT4G18950 66.042 0.0 564
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Alju08g1890 PK_Tyr_Ser-Thr 9.9e-54 CL0016