Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1871 ATGCCATCCGTGGAAAAGTGGTTGGAAGAAGTGAATGCTGTCCTGGAGGAGGTGCAAAAGCAGCAACAAGAGCTTGAAGGAGGAGGAAACAGGTTTTTTAACGTGTCACTCAGATACTCTTTAGCCAAACAAATGGAAGATAAGGCTAACAAGATGAAGGAGCTCAAAAGCAATTCCAGCTTTGAGCTATTTTCCCAATTGACCCAACTTCCTGGCATCACCTACTTCTCTTCCAAAGAGTTTGTGGATTTCAACTCAAGGAAATCAGCTTACATTCGTCTTTTAGAGGCAATTAAAGATGACAAGAACAAGATGGTGGGACTGTACGGTATGGGCGGCTCAGGCAAAACCACCTTGGCAAAGCAAGTAGGTAAGAAAGTGGATGAGCTCAAGCTTTTTGAAAAGGTTGTCATGGCAGTCGTTTCAAAACCCCCAAATATTTTGAACATTCAACAAGAAATAGCAGGGCAAATAGGCTTGCCACTTCAAGAACCAACTCAACTTACTAAAGCACAAAGGCTGTCACAAGGGTTGAAAAATAAGAGGATTCTTATAATCTTGGATGATGTGTGGAGCAAACTAGGCCTTGAGGAAATTGGCATTCCACTACACGAACGTTGTTGTGTCATGTTGACCACTCGCCTTCATGGTGTATGTCTTGATATGGATTGTGAGAGTATAATTAAATTGCCTATCTTAACAGATGAAGATGCATGGGAGTTGTTCAAGGTGCGTGCTAACCCAACCAATGTCTCAAAGAATGAGTTTGATAGCATTGGGAGGAAGATTGTTGATGAGTGTAAAGGTCTGCCTATAGCAATTGTGACAGTTGGAAGCACATTAAAAAGAAGAGGTGTTCGAGTGTGGGAGTCAACACTACGGAAGCTACAACGTCCCCTGCCATTGGATGTTGAAGATGATTTCAAGACCCCTTATGCAAATCTGGAAGTAAGTTATGATAATTTACGGAGCCCACTAGACCAGTCACTCTTCTTATTGTGTTCTATGTTTCCTGAGGATCATGAAATCCATATAGAGGATATAATTCGATTTGCCAAGGGGACTTTGAAGTTTGTGATTGATTACACAATGGAGGATGCAAGGAATGAGATTTTAGTAAGCATTGACAGGTTATTAGATTCTTGTTTATTAATGCATACAAATAAGCAAGCATGTGTGAAAATGCACGACTTTGTTCGAGATGTAGCTTTGTGGATCACAAAGAAGCAACATCAAGCAATTTTGGTCGACAATCATGTAGTTTTGAGGACATTGGTTGCAAATGAAACTTTGAAAGAGACGAAGGCAATATCATTGTGGAACTTGGAAAACAATTTTAAGCTCTCTAATCAATTGTGTTGTTCAACACTTGAGATTCTGCTACTTCATTCAAATGAATGGTTCATTAAAGATCTTGGAGGGATTGAAGCACTCAAAGTCTTGGCCCTTGTAAAATATAGCTTTCGATGGAGAGATTATTATGGGGTACGGATTCAGTGGTCAATACCGCAATCAATTGTGTCATCATTAATGAATCTACACACCTTATGCTTTAGAGGAATTGCATTGGGTGACATCTCTTTTCTATGTCAACTCAAAAGGCTAGAGATTCTTGACTTGCATGGTTCTCAATTTGATGAATTACCTGGTGGAATTGTAGATATGAAAAAGTTGAAGCTTTTGGATGTTTTTGGGTGTCAAATTAAGAAAAATCCATTAGAAGTTATTCAAAAATGTGAGGAACTTGAAGAACTATACTTTTATGATAATAAATCTGCCATCTCAGAAAATTTTTCTCTTTCAGGATTGAAGAGGTATGTTATCTGTGATTCCGCATCCAAAATTATTAATCATTATGATTTTTCTTTTGGAGATTTAGATAGTTGCGAGGAAGCATTGAGAGCTTTAAGTATACAAGGCTTCAAAGTCTCTGATTTGAATCCATCAATGAAAGATCTCATTCTTAAAGCGAACTCTCTTGGGCTAGAGAATTGTATGTGGGATCATAAAGATATAAATGTTAAGATAAAGCTCTTATTCGCTTTAAATTGTCCAGAGAAAAAATTTATAGTTGAAAACCTTGGTACCGAAGTTCTACAAACTGGACAGGTGTTCCCCGACCTGATTACTTTAAAATTGAGAGAAATGAATAGTCTTGAACAAGTGTTCCAAGATTCATCTGTCATATGTTCTCTCCCAAGGTTACAAGAACTAGACATAGAGGACTGCCCCAAGTTGACAACTATATTCCCCCATGCCACTGTTACAAGCCTAGCAAAACTGAGAGAAGTTCATATACTTTGTTGCAACAAAATGAAATGGCTATTCTCTTATTCTTTGGCTGCTCATTGTCCTTCACTAGAGAAATTGCAAATACGATATTGTTTTGAACTTGAGAGGCTCTTCCATGAAGAAGTTGCGAATGGGGATCGTCTATTGCACCAAAGGGAGTCCCATAATGATTTGCTTAATTATCCATACGGGAATGAGGCTGAGAGTGCATTTAATGTGCAAGTGAGAAGAACAGAAGAAGGTGAAGATTTTGTTGAAGCACAAGAAGAACAACCTTTGAAGCTGATTTCAGAGTTGTGTTCTTTACGGTTAGATAGTCTAGCAGCATTGGAATATATTTGGAAGGGCCCCACACAAAGTGTGAGCCTCCATAGACTTGAAGAGGTTATATTGATTAGGTGCTCAAAGTTGAGGAATATCTTCACTTTTGCTATTGTTACAAGCCTTCCAGAGTTGAGGAAACTATCTGTACGTGAATGTAAGGAATGGGAGGGAATAATCTGCGAAGAATCAGTTAAATACCTTTCTTCTTCTTCTTCTTCTAATGTTTGCTTCCCCAAACTTAAGAATATTGTGGTAATGGATTGCAACAAAGTGAAAAGGTTGTTCTCATATTCTCTGGCTTCTCACTGTCCTTCACTAGAGGACCTTTTCATAAAGGATTGCTCTGAACTTGAGAGTCTTGTTGATGAAGAAGCATCACATGAGGACATGCGACTACTGCTATTAAGAGAGATTTTTGGAGGGAGATTTGAGCACAAGCTAGAGTCCCTTCATAATAAACAGCAATGTTCACCACATAAATACAAGAATGAGAGAGTAAAGAGTTAA 3123 0.3846 MPSVEKWLEEVNAVLEEVQKQQQELEGGGNRFFNVSLRYSLAKQMEDKANKMKELKSNSSFELFSQLTQLPGITYFSSKEFVDFNSRKSAYIRLLEAIKDDKNKMVGLYGMGGSGKTTLAKQVGKKVDELKLFEKVVMAVVSKPPNILNIQQEIAGQIGLPLQEPTQLTKAQRLSQGLKNKRILIILDDVWSKLGLEEIGIPLHERCCVMLTTRLHGVCLDMDCESIIKLPILTDEDAWELFKVRANPTNVSKNEFDSIGRKIVDECKGLPIAIVTVGSTLKRRGVRVWESTLRKLQRPLPLDVEDDFKTPYANLEVSYDNLRSPLDQSLFLLCSMFPEDHEIHIEDIIRFAKGTLKFVIDYTMEDARNEILVSIDRLLDSCLLMHTNKQACVKMHDFVRDVALWITKKQHQAILVDNHVVLRTLVANETLKETKAISLWNLENNFKLSNQLCCSTLEILLLHSNEWFIKDLGGIEALKVLALVKYSFRWRDYYGVRIQWSIPQSIVSSLMNLHTLCFRGIALGDISFLCQLKRLEILDLHGSQFDELPGGIVDMKKLKLLDVFGCQIKKNPLEVIQKCEELEELYFYDNKSAISENFSLSGLKRYVICDSASKIINHYDFSFGDLDSCEEALRALSIQGFKVSDLNPSMKDLILKANSLGLENCMWDHKDINVKIKLLFALNCPEKKFIVENLGTEVLQTGQVFPDLITLKLREMNSLEQVFQDSSVICSLPRLQELDIEDCPKLTTIFPHATVTSLAKLREVHILCCNKMKWLFSYSLAAHCPSLEKLQIRYCFELERLFHEEVANGDRLLHQRESHNDLLNYPYGNEAESAFNVQVRRTEEGEDFVEAQEEQPLKLISELCSLRLDSLAALEYIWKGPTQSVSLHRLEEVILIRCSKLRNIFTFAIVTSLPELRKLSVRECKEWEGIICEESVKYLSSSSSSNVCFPKLKNIVVMDCNKVKRLFSYSLASHCPSLEDLFIKDCSELESLVDEEASHEDMRLLLLREIFGGRFEHKLESLHNKQQCSPHKYKNERVKS 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1871 1040 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 787 993 - -
Alju08g1871 1040 FunFam Probable disease resistance protein At1g61300 76 226 - -
Alju08g1871 1040 SUPERFAMILY RNI-like 875 996 - -
Alju08g1871 1040 Gene3D Ribonuclease Inhibitor 839 1005 IPR032675 -
Alju08g1871 1040 Gene3D Ribonuclease Inhibitor 620 812 IPR032675 -
Alju08g1871 1040 PRINTS Disease resistance protein signature 730 746 - -
Alju08g1871 1040 PRINTS Disease resistance protein signature 105 120 - -
Alju08g1871 1040 PRINTS Disease resistance protein signature 177 191 - -
Alju08g1871 1040 PRINTS Disease resistance protein signature 267 281 - -
Alju08g1871 1040 SUPERFAMILY L domain-like 394 825 - -
Alju08g1871 1040 Gene3D - 72 229 IPR027417 -
Alju08g1871 1040 Gene3D - 232 318 IPR042197 -
Alju08g1871 1040 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 334 IPR027417 -
Alju08g1871 1040 Pfam NB-ARC domain 99 320 IPR002182 GO:0043531
Alju08g1871 1040 Gene3D Ribonuclease Inhibitor 403 618 IPR032675 -
Alju08g1871 1040 SMART AAA_5 102 233 IPR003593 GO:0016887
Alju08g1871 1040 Gene3D - 319 402 IPR036388 -
Alju08g1871 1040 Coils Coil 4 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1871 Alju-ChrAlju08 16247138 16254599 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1871 104 410 WRKY Transcription Factor Family AT5G45050 27.019 9.00e-11 64.3