Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1849 ATGAGTGTGGTTGGGTTTGACATTGGAAATGAGAACTGTGTCATTGCTGTAGTGAAGCAGCGTGGGATTGATGTTTTACTGAATGATGAATCAAAACGCGAAACCCCTTCGGTGGTCTGCTTTGGAGAGAAGCAAAGGTTTTTGGGTTCAGCTGGTGCTGCATCTGCTATGATGAACATCAAATCCACAATATCTCAAGTGAAGAGACTGATAGGGAGAAAATATGCAGACCATGATTTGCAAAATGAGCTGAAAATGCTCCCCGTTGAAACTTCTGAAGGCCAAGGTGGTGGCATTTTGGTTCACTTGAAATATCTCAAGGAGACCCATACATTTACACCAGTTCAAATTCTAGCAATGCTCCTTGCTCATTTGAAAACTTTAACTGAAAGGGATTTGGAAATGTCAATTTCGGATTGTGTTATTGGGGTTCCATCATACTTTTCAGACTTGCAGAGACGGGCATATCTTGATGCAGCAAGAATTGCTGGGTTGAAGCCTCTGAGATTGATTCATGATTGTACTGCAACTGCTCTTGGTTATGGAATTTACAAAACAGATTTTCTTGGAACAGGTCCAACCTATGTAGCATTTGTGGACATTGGTCACTGTGATACACAAATCTCCATTGCATCATTTGAGGCTGGGAGAATGAAGATACTTTCCCATGCTTTTGATAGGAATTTAGGGGGAAGAGACTTTGATGAGGTTCTCTTTAGTCATTTTGCAGCACAGTTTAAGGAACAGTACAGCATTGACGTGTACTCTAATGTCAAGGCATGTATCAGATTACGCACTTCATGTGAGAAGTTGAAGAAAGTTTTGAGTGCAAATCATGAGGCAACTTTAAACATTGAGTGCTTGATGGATGAGAAAGATGTCAAAGGCTTCATCAAGAGGGAGGAATTTGAGAAATTGGCATCAGTGTTACTGGAGAAGATTTGTGTTCCCTGCCGTAAAGCATTAGGTGATGCAAGATTAACTGCAGACAGGATCCATTCTGTAGAGCTAGTTGGCTCGGGTTCTAGAATTCCTGCTATAGTTAGATTATTAACTTCTCAATTCAGTAGAGAACCCAGCCGAACATTGAATGCAAGTGAATGTGTAGCTCGTGGCTGTGCTCTTCAATGTGCAATGCTCAGCCCTGTTTTCCGTGTTAGAGAATATGAGGTCCTGGATTTAAATCCATTCTCCATTGGACTTTGGACAGATGGTGGTCCAATTAGTGCAGTAACAAATGGCATACTTTTCCCAAAGGGCCAATCCATTCCATGTGTTAAAATTCTAACATTTCACCGAAGTAGTTTGTTCCATTTGGAAGCGTTCTATGCTAATCCAAATGAACTACCACCTGGGACATCTCCTAAAATTAGTAGCTTCACGATTGGTCCTTTCCATGGATCCCATGGCTGTAAGACAAGGGTTAAAGTTAGAGTTCAACTAAATCTGCATGGCATTATCAGTGTTGAATCAGCTACATTGATTGAAGATCAGGTAGATGATATAAAGGGTAATGATCATCCAAATACTGAATCTATGGATGTTGACCCTGGCACTGATCAGACAGTAGCAAATGGTGTTGATGATAGCAACAATAGAAAGGATGACCCACATAAATCGGCGGATTCTGCGAGAAAAGATAAAACTACCAAAAGACATGTGCCAGTGAGTGAGAACGTCTACGGTGGAATGACCAAGGCTGAGATCTTGGAAGCCCATGAAAAAGAGCTCCTGTTGACTCAACAGGACAGAGCTATGGAGCGAACTAAAGAAAAGAAGAATAGCTTGGAGTCCTATATTTACGAGATGAGGAGCAAGCTCTTTGACACCTACCGGAGCTTTGCAAGTGAACAAGAGAGGGAGGGCATATCTAAGAGCCTGCAAGAGACTGAAGAGTGGCTTTATGAGGATGGTGATGATGAAACTGAGGGGTCATACTCAGAAAAACTAGAAGATATAAAGAAGCTTGTGGATCCAATTGAGAATCGGTATAAAGATGAAGAAGCAAGAGCACAAGCTACAAGAGATCTGTTGAAGTGCATTTTGGATCATCGCAACTCTGCGGATTCCCTCCTTCCCCAGGATAAAGAATTGATCATTAATGAGTGCAATAAGGCAGAGCAGTGGCTGAGAGAGAAATTACAGCAACAAGACTCCATGCCTAAGGACAATGACCCAATTATATGGTCAAGTGATATTAAAAGCAAGGCAGAGGATTTGAAATCGTTGTGCCAACAGGTGCTGGGATCCGAGGGTTCCTCAACAAATCCAGAGGACAAGGACAAAGACAAGCCACATACTTCCAGTCACCTTTGA 2316 0.4193 MSVVGFDIGNENCVIAVVKQRGIDVLLNDESKRETPSVVCFGEKQRFLGSAGAASAMMNIKSTISQVKRLIGRKYADHDLQNELKMLPVETSEGQGGGILVHLKYLKETHTFTPVQILAMLLAHLKTLTERDLEMSISDCVIGVPSYFSDLQRRAYLDAARIAGLKPLRLIHDCTATALGYGIYKTDFLGTGPTYVAFVDIGHCDTQISIASFEAGRMKILSHAFDRNLGGRDFDEVLFSHFAAQFKEQYSIDVYSNVKACIRLRTSCEKLKKVLSANHEATLNIECLMDEKDVKGFIKREEFEKLASVLLEKICVPCRKALGDARLTADRIHSVELVGSGSRIPAIVRLLTSQFSREPSRTLNASECVARGCALQCAMLSPVFRVREYEVLDLNPFSIGLWTDGGPISAVTNGILFPKGQSIPCVKILTFHRSSLFHLEAFYANPNELPPGTSPKISSFTIGPFHGSHGCKTRVKVRVQLNLHGIISVESATLIEDQVDDIKGNDHPNTESMDVDPGTDQTVANGVDDSNNRKDDPHKSADSARKDKTTKRHVPVSENVYGGMTKAEILEAHEKELLLTQQDRAMERTKEKKNSLESYIYEMRSKLFDTYRSFASEQEREGISKSLQETEEWLYEDGDDETEGSYSEKLEDIKKLVDPIENRYKDEEARAQATRDLLKCILDHRNSADSLLPQDKELIINECNKAEQWLREKLQQQDSMPKDNDPIIWSSDIKSKAEDLKSLCQQVLGSEGSSTNPEDKDKDKPHTSSHL 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1849 771 PANTHER HSC70CB, ISOFORM G-RELATED 1 754 - -
Alju08g1849 771 SUPERFAMILY Actin-like ATPase domain 192 381 IPR043129 -
Alju08g1849 771 Gene3D - 564 675 IPR029048 -
Alju08g1849 771 FunFam Heat shock 70 kDa protein 4 99 194 - -
Alju08g1849 771 FunFam Heat shock 70 kDa protein 4 1 81 - -
Alju08g1849 771 MobiDBLite consensus disorder prediction 529 553 - -
Alju08g1849 771 MobiDBLite consensus disorder prediction 512 528 - -
Alju08g1849 771 FunFam Heat shock 70 kDa protein 4 564 674 - -
Alju08g1849 771 PRINTS 70kDa heat shock protein signature 2 15 - -
Alju08g1849 771 PRINTS 70kDa heat shock protein signature 388 407 - -
Alju08g1849 771 PRINTS 70kDa heat shock protein signature 140 160 - -
Alju08g1849 771 PRINTS 70kDa heat shock protein signature 30 42 - -
Alju08g1849 771 PRINTS 70kDa heat shock protein signature 332 348 - -
Alju08g1849 771 PRINTS 70kDa heat shock protein signature 363 383 - -
Alju08g1849 771 PRINTS 70kDa heat shock protein signature 472 488 - -
Alju08g1849 771 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 597 IPR029047 -
Alju08g1849 771 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 562 IPR029047 -
Alju08g1849 771 Gene3D - 38 113 - -
Alju08g1849 771 Gene3D - 5 374 - -
Alju08g1849 771 MobiDBLite consensus disorder prediction 499 553 - -
Alju08g1849 771 MobiDBLite consensus disorder prediction 755 771 - -
Alju08g1849 771 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 566 664 IPR029048 -
Alju08g1849 771 Gene3D Actin; Chain A, domain 4 230 313 - -
Alju08g1849 771 FunFam Heat shock 70 kDa protein 4 230 313 - -
Alju08g1849 771 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Alju08g1849 771 CDD HSPA4_like_NDB 2 381 - -
Alju08g1849 771 MobiDBLite consensus disorder prediction 746 771 - -
Alju08g1849 771 Gene3D - 186 360 - -
Alju08g1849 771 FunFam Heat shock 70 kDa protein 4 38 113 - -
Alju08g1849 771 Pfam Hsp70 protein 3 664 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1849 Alju-ChrAlju08 15987862 15992847 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1849 4 660 Calmodulin-binding Proteins AT1G16030 30.226 1.61e-86 285