Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1839 ATGGTTGTCGCAAAGAAAGCATATCGTAGTGTAGAACCAACGCCAAAGCTTGAAGAAATAGGAATTGGAAAAGCATCAAGATACAGAAACACAGAGAAAATGTTCCTCTTCAAACAAAACGATATTTCTAACGATGTACATACTATTATCTCCTCTCTCTCTCTATGTATATATTCCTTGTGTGAAAAACATTACTTGGTTGGTGGTATTCTTGATTCTTTGTATTTTTTGGTTTCTGAAGAAATAATCAAAAGAAATAGAAAAAAGATAACTAGCTCTTCAGTTGATTATATATCGTTTAGCCACATCATGGAAGATATTATTGTGAGAAGAGTTATTCCCTCAGATAACAGTTGCCTCTTCAATGCAATCGGGTACGTTATGGATCATGATAAAACTAAAGCTTCTGAGTTGAGACAGGTTATAGCTGCAACAGTAGCAAGTGATCCACAGAAATATTCTGAAGCATTTCTTGGAAAGCCAAATGCAGACTATTGTGCCTGGATCCTTGACTCGGAGAAGTGGGGAGGTGCCATTGAGCTTTCAATATTAGCTGATTATTATGGACGTGAAATCGGAGCATATGATATCCAAACGACACGATGTGATGTGTATGGTCAGGACGGAAAGTATTCTGAAAGGGTCATGCTGATTTATGATGGTCTCCATTATGACGCATTAGCCATGTCTCCCTTTGAGGGTGCCCCTGAGGAGTTTGATCAGACCATATTTGCTGTACGGAAAGACAGAAGCATTGGACCTGTTGAGAGGCTTGCTCTTGATTTTGTTAAGGACCAACAAAGGAAACGAAGCTATACCGACACCTCCAACTTCACGCTTCGCTGCGGGGTCTGCCAAATAGGCGTAATTGGTCAGAAGGAGGCAGTGGAGCATGCACAAGCAACTGGCCATGTTAACTTTCAAGAATATAGATGA 936 0.4017 MVVAKKAYRSVEPTPKLEEIGIGKASRYRNTEKMFLFKQNDISNDVHTIISSLSLCIYSLCEKHYLVGGILDSLYFLVSEEIIKRNRKKITSSSVDYISFSHIMEDIIVRRVIPSDNSCLFNAIGYVMDHDKTKASELRQVIAATVASDPQKYSEAFLGKPNADYCAWILDSEKWGGAIELSILADYYGREIGAYDIQTTRCDVYGQDGKYSERVMLIYDGLHYDALAMSPFEGAPEEFDQTIFAVRKDRSIGPVERLALDFVKDQQRKRSYTDTSNFTLRCGVCQIGVIGQKEAVEHAQATGHVNFQEYR 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1839 311 SUPERFAMILY Cysteine proteinases 107 227 IPR038765 -
Alju08g1839 311 Pfam OTU-like cysteine protease 115 201 IPR003323 -
Alju08g1839 311 ProSiteProfiles OTU domain profile. 108 230 IPR003323 -
Alju08g1839 311 CDD OTU_plant_OTU1_2-like 107 269 - -
Alju08g1839 311 Gene3D - 94 276 - -
Alju08g1839 311 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 89 309 - -
Alju08g1839 311 FunFam ubiquitin thioesterase OTU1 104 276 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1839 104 311 C2H2 Transcription Factor Family AT1G50670 82.692 4.37e-129 364