Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1837 ATGAAGATAGAAGCAGAAACATTGGTAATGAGGTCTAAGGAGATTGTTTCTGTATGTATTGGAATCTCCATGAGAATTCTCGAACGACTCCTTTTTGCTGCATTCACCTGCATTCTCGCTCTAGGAGGGTCAATAATGGGGACAATAGTGGGAGGGATGAAGGGTCATAGATCAGAGGCTGGGATACTTGATGGAGCTGGGAAAGGAGCAATTTTAGGAGCCATTGCTGCTCTTGGATTGCTTGATTCTGTTGCTGATGAAGATCATCAGCCTATGTCCAAGGTTGCACTATTAACTTGTTTGTTCAATGGGAAGGTCCTGATGGAATGTGTATATTCAGGCTATCAACGGCATATTGGGACTCCAGAAACCATCTACAGAGAAGTATCAGATATTTATGATATGAGAGGAGTACCAGGACTGTCCCAGAAATTGATCCAAGGCCTGCCTTTGCATCAATTCAACTCCACAAAAATGCCGACTTTATACAATGAATCTTGCTGCTCCATTTGCTTCCAGGAGTTTGAAGAAGGAGAAGTGATAAGGATGCTTCCAAAATGTGACCATGTTTTTCACTTTCACTGTATAGATAAATGGCTCATCCAACAAGGATCTTGCCCTATGTGTAGAACTTATGTTCTTGAGGATCATTTTGATTATTAG 663 0.4148 MKIEAETLVMRSKEIVSVCIGISMRILERLLFAAFTCILALGGSIMGTIVGGMKGHRSEAGILDGAGKGAILGAIAALGLLDSVADEDHQPMSKVALLTCLFNGKVLMECVYSGYQRHIGTPETIYREVSDIYDMRGVPGLSQKLIQGLPLHQFNSTKMPTLYNESCCSICFQEFEEGEVIRMLPKCDHVFHFHCIDKWLIQQGSCPMCRTYVLEDHFDY 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1837 220 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 17 211 IPR044523 -
Alju08g1837 220 SUPERFAMILY RING/U-box 162 216 - -
Alju08g1837 220 SMART ring_2 168 209 IPR001841 -
Alju08g1837 220 Pfam Ring finger domain 168 210 IPR001841 -
Alju08g1837 220 ProSiteProfiles Zinc finger RING-type profile. 168 210 IPR001841 -
Alju08g1837 220 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 130 214 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1837 Alju-ChrAlju08 15743342 15745655 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1837 26 213 C3H Transcription Factor Family AT5G66070 31.658 9.90e-32 113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g1837 08 15743342 15745655 Alju08g1837 08 15743342 15745655 ECH