Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1828 ATGATGAACACGAATAGCCATAATGATGAGGAGAATAATGAACATGGGTTACCTTCGATTAACGGCGTTGCCGAAGGAGGTGGTGGTGGTGAGTGCGCCGGTGTGGCGGCAGCGGCAGTAGCGGAGGAGGTTGTCCTCAAGAAGGGTCCATGGACGGCGGAGGAGGACGCGGTGCTTATTGATTATGTGACCAAGCATGGTGAAGGGAATTGGAATGCGGTGCAAAGGAATACGGGGTTGGCTCGTTGTGGTAAGAGCTGTAGATTGAGATGGACGAACCATTTGCGTCCAAATCTGAAGAAGGGTGCTTTTTCTCCTGAGGAAGAGAAGCTCATTCTGGAGCTTCATGCTCAGTTCGGCAACAAATGGGCCCGAATGGCCACTCTTTTACCTGGGCGAACAGACAATGAAATCAAGAACTACTGGAACACTAGGATGAAGCGCCGGCAAAAACAAGGCCTGCCACTTTATTGCAGTGATTCTGATCAGCCAGCCATATCTGCAGCACTGGCCAAAATTAATTCTTCTATTACAAAATTGGATTATTATAATCAGAATCACTATCCTGTGTCTTCACTCCATACAGGATCCTCTTATTCCACTCATACCCCTTTCTTGGACCCCAATTATCTTTCTTCTTCTTCCCTTTTCACCTTCCCCTCTCAACAGCCTACTTCTTCATTACACATCACCCCACTCCATTCCAAGCGTTGCCGCACCTATTTTCCCCTCCCTGATGCTTCTTTAACTACCCCATTGGTGGATCTTGATGGACTCAACTTTCCAGCCCAATTTAATTCAAGTTCATGCCAAATCTTTCAGATCCCATTGGATTTATCATCTTCAGTTCCTGGGGTTCCAAGCTCATCTTCCATTTTGTTAACCAAAATGGAGCTCCCTTCAAACCAATTTGCCCAATCCAATAATAACCTGCTGGGGGATATTCTTCTGGAAGCTCAAGTATTGGTTTCTGACCAGGATCTGAAGAAACGAACCTATTCGAGTTTCAGTGAAGGAAATGGTTTTTCAGATGGATATATTGGCTTGGACGATATGCCTCATAGCTCTGTTTACTGGTCTTCAGGACTGAAGCCAAAGTCAGAAGCATCAGACATGATTGAGCTTTCCTCACTGATCTCATCTGGAATGCCTTCGACCATTCAGGTTCCTGAATGGCATAACAACGACACTGCTGCACAGGCATCGAATGTTCAATCTTCCAGAGCTACCGCCATAGCTGATGATAATTTTGAGCTTGATTTCAAACCTATTACTTCGTTGATACCCGTCAACACCACAACAGACCCTAATGAAAACCCTGGCTACTTCTCATGGGACACCTTACCTGGACTCTGCTGA 1359 0.4592 MMNTNSHNDEENNEHGLPSINGVAEGGGGGECAGVAAAAVAEEVVLKKGPWTAEEDAVLIDYVTKHGEGNWNAVQRNTGLARCGKSCRLRWTNHLRPNLKKGAFSPEEEKLILELHAQFGNKWARMATLLPGRTDNEIKNYWNTRMKRRQKQGLPLYCSDSDQPAISAALAKINSSITKLDYYNQNHYPVSSLHTGSSYSTHTPFLDPNYLSSSSLFTFPSQQPTSSLHITPLHSKRCRTYFPLPDASLTTPLVDLDGLNFPAQFNSSSCQIFQIPLDLSSSVPGVPSSSSILLTKMELPSNQFAQSNNNLLGDILLEAQVLVSDQDLKKRTYSSFSEGNGFSDGYIGLDDMPHSSVYWSSGLKPKSEASDMIELSSLISSGMPSTIQVPEWHNNDTAAQASNVQSSRATAIADDNFELDFKPITSLIPVNTTTDPNENPGYFSWDTLPGLC 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1828 452 ProSiteProfiles Myb-like domain profile. 96 146 IPR001005 -
Alju08g1828 452 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 46 95 IPR017930 -
Alju08g1828 452 CDD SANT 103 144 IPR001005 -
Alju08g1828 452 SUPERFAMILY Homeodomain-like 47 142 IPR009057 -
Alju08g1828 452 FunFam Transcription factor GAMYB 103 149 - -
Alju08g1828 452 MobiDBLite consensus disorder prediction 1 24 - -
Alju08g1828 452 FunFam MYB-related transcription factor 47 100 - -
Alju08g1828 452 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 96 150 IPR017930 -
Alju08g1828 452 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 16 405 - -
Alju08g1828 452 ProSiteProfiles Myb-like domain profile. 43 95 IPR001005 -
Alju08g1828 452 SMART sant 47 97 IPR001005 -
Alju08g1828 452 SMART sant 100 148 IPR001005 -
Alju08g1828 452 Gene3D - 47 100 - -
Alju08g1828 452 CDD SANT 50 95 IPR001005 -
Alju08g1828 452 Gene3D - 103 149 - -
Alju08g1828 452 Pfam Myb-like DNA-binding domain 48 95 IPR001005 -
Alju08g1828 452 Pfam Myb-like DNA-binding domain 101 144 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1828 Alju-ChrAlju08 15673661 15676603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1828 46 186 MYB Transcription Factor Family AT2G32460 66.667 1.81e-64 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju08g1828 Myb_DNA-binding 1e-13 CL0123