Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1818 ATGTCAAGCACGTGGCACCACGTCTGCGATCGAAGTAATAGGGAAGGCAAGGAAATTTGCAGATTCTCAATGGCAAATTTGCCCCAATCGCTCTCTATGAATGCGCCGTTCGGAGCCCCCGGTGCCTCAGCCCAGAACGCCGCCGCTACTCAGGTCAACAAGGAACGTAAGCTGGCGTCAGCAGAGCACCTTGTGCTTGAACTAAGCAACCCCGAGCTCCGAGAAAATGCGCTTCTGGAACTCTCTAAGAAAAGGGAGCTGTTTCAAGATCTTGCTCCATTACTTTGGAATTCTTTTGGTACTATTGCAGCACTTTTACAGGAAATAGTTTCAATATACCCAGTTCTTTCACCACCTAATCTTACCCCAGCACAGTCAAATCGAGTGTGCAATGCTCTTGCACTTCTTCAGTGTGTGGCCTCTCATCCAGATACAAGGATGCTATTCCTCAATGCTCATATACCACTATATCTATATCCCTTCCTTAATACAACAAGCAAGTCAAGACCATTTGAGTATTTGAGGCTTACCAGTCTTGGTGTCATTGGTGCCTTGGTGAAGGTTGATGATACAGAAGTTATAAGCTTCCTTCTTTCAACAGAGATAATACCTCTCTGCCTGCGCACCATGGAAATGGGCAGTGAATTGTCAAAAACAGTTGCGACATTTATAGTCCAGAAGATTCTATTGGATGATGTGGGATTGGATTATGTATGTACTACTGCTGAGCGGTTTTTTGCAGTAGGTAGGGTCTTGGGAAACATGGTGGGGGCTCTTGCCGAGCAACCGTCATCTCGTCTGTTAAAACATATCATTAGATGTTATCTCCGCCTGTCAGATAATCCAAGGGCCTGTGATGCATTACGAAGTTGTCTGCCAGACATGTTGAGAGATGCTACTTTCAATAGCTGCCTTCGGGAAGACCCAACAACCAGGAGGTGGCTGCAACAATTGCTTATAAATGTTGGAGGGGGTCGGGTTCCTACTGCAATGCAAGCTGGAGGTAGCTTCGAACACATGATGGTACCATAA 1032 0.4612 MSSTWHHVCDRSNREGKEICRFSMANLPQSLSMNAPFGAPGASAQNAAATQVNKERKLASAEHLVLELSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYVCTTAERFFAVGRVLGNMVGALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLINVGGGRVPTAMQAGGSFEHMMVP 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1818 343 FunFam Cell differentiation protein RCD1 54 325 - -
Alju08g1818 343 Pfam Cell differentiation family, Rcd1-like 64 322 - -
Alju08g1818 343 SUPERFAMILY ARM repeat 66 293 IPR016024 -
Alju08g1818 343 Gene3D - 53 323 IPR011989 -
Alju08g1818 343 PANTHER UNCHARACTERIZED 54 324 IPR007216 GO:0006402|GO:0030014
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1818 Alju-ChrAlju08 15563584 15568035 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Alju08g1818 Rcd1 8.3e-129 No_clan