Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1810 ATGGCGCTGATCAGTTATCACGTTTTTTTGAGTTTCAGAGGGGAAGACACTCGCACAAGCTTCACCGACCACTTGTACGCTGCGTTGCAGCGAAAAGGGATCGTCACTTTCAGGGACGACCAAGAACTCGAGCGAGGACGAGTTATTTCCGAGAAACTCATGAAAGCTATTGACGAATCTCTGTTTGCAATTGTCATTCTTTCCCAGGATTATGCTTTCTCTTCTTGGTGTTTGGATGAACTGCAAAAAATTGTTGAATCCAAACAAAACTTGACAATTTTTCCAGTTTTTTATGGCGTAGATCCGTCTGATGTTCGACAACAAAAGGGAATTATTAGGGAAGCTTTTGAGAAACATGAAGGAAAATTCCCAGATTGTAAGGTCAGAAGATGGAGAAGAGCCTTAACACAAGTTGCAAATTTAGCTGGTTGGGATGCTAAAAACAAGCATGAAGCAGGAATCGTAGAACATATTGCTAATGCAATATGGACCAAATTGCGTGTTAAATTGCCACCTAATTTTGCTCATTTAGTTGGACTTGAATCAAAGGTGGACACATTGGTCTCTCTTATGAAGATAGAGCTGAATCATAAATGTTTGATAGGAATATGGGGCATGGGCGGAATAGGCAAAACAACTCTTGCTAGAGTTGTTTATGAGGCAATTGGAGACAAGTTTGAAACTAGTTGCTTTCTTGCCAACATAAGGAAGGATTCAGAAAGAAAGGGTTTAGTTTACTTGCAAAAGAAGTTTCTTTCTGCTCTTCTTCATCAAGGAACAAACATAAAAATCAATGACTCCTATGATGGAGTTGAGGCAATAAGAAGCTTTTTATGCAATAAAAAAGTTCTTATTGTTCTTGATGATGTGAGTCATATAAGCCAACTAGAGAATTTAGTTGGAGATAAAGATTGGTTTGGGGATGGAAGCAGAATCTTGGTGACTACAAGAGACATACACTTGTTGACAGCTCATGATCAATTTGAAAAGTATGAAATGAAGATGCTAGGAAGAGGAGCATCTCTCAATCTCTTGTGTAAGCATGCTTTTAAAACGGATTATCCTCAACAAGGTTATTGGGAATTGTCCAAAAAGGTGGTTGATTATGCAGGTGGTCTTCCTTTAGCTCTCCAAGTGTTGGGCTCATTTCTTTGTAAAAGAAGCATAGCTGAATGGAGAGACACATTGAATAAGTTAAAGCGAAATTTACATAAAGATATTTTCAAGACACTTCGAATAAGTTATGATGGGCTAGATGATGAAGAGTACAAGACTATATTCTTAGATATTGCATGCTTTTTTAATTGGGAGAAAAAAGTTGAAGTGACTAAAATATTGGAAAATTGTGGTCTTCATGCAACAATTGGAATCCCAGTTCTAATTGAAAAATCTTTGTTGAGTACTTACATTTCATTCAATGGCCAAGAATATGTATATATGCATGATTTGCTTCAAGAGATTGGAAAAAACATTGTTATGCAAGAATCTCCAAGTGATGCTGGCAGACGCAGTAGGTTGTGGACGTGGGAGCAGATTGATCAAGCTTTTAGAGGAAATGCAGGAAGCAAAAATGTTCAAAGTATAGTTTTGAATCTAAAGCAAGCATATGAAGCAAATTGGCAGCCGAATTGCTTCTCAAAGATGGGTAATCTTAGATTACTCTACTTAAGTAATGTGAATCTTTTGCATGGTCTCAACTCTCTTCCTACTACTCTGAAAGTTGTCATATGGGAGAAATATCCTTTGGAAGCTCTACCACGCAATATTGACCAACTATATCAGCTTGTGGAGCTTACCTTACATCGTAGCAGAATCAGGAAACTTTGGAATGGAAGACCGTTTTTAGGAATGTTGAAGTTCATGGACTTGAGTTTCTCCAAGGAGCTAATTGAGACTCCAGATTTCAAGGGAGTTCCAAACCTTGAAAGTTTGTTTCTTGAGCATTGCATAAATCTAGTTAAGGTTCATGAGTCCCTTGGGCAGCTCAAGAAGCTGGTTAAGTTGAGTTTGAGAGGCTGCCAAAATCTCACAACCCTTCCAAGGAAATTGGAACTGAATTCTCTGCAGGACTTTTCTCTTTATGGATGCTCAAAACTTCAAAAGCTTTCTGAATTTGGAGAAAACATGAAATGTCTATCCATCTTTGATCTGAGTGGAACTAATATAAAAAAAGTACCATCTTCCATAGTTCATTTATCAAATCTTAAGGAGCTATACCTCCAGGGATGCAACCGGCGAGCTTGGAATTCATGGACCTTCTTTGGGTACTTTGGTCATTTAATAGGTCGGTTTCTGGGGAATCCAGTAGTATCCAAGGGATTGAAGTTACCAAATTCTTTCACAGGCCTTTCTTCATTAAGAAAACTGGATTTAAGTTTCAGCAATCTGTATGATGGAGCAATCCCTAATGATTTAAGTGGCTTATCATCATTGATGGATTTTAATCTGAGGGGAAACAATTTTATTTCCCTACCTGTTGGCTGCATCTCCAATCTTCTCAAACTTGAACAATTTGACTTGAGTAATTGTGTTGATCTTCAGTCAATTCCTCAGCTTCCACCTAATTTACTTAGAGTATATGTAGGCTGTTGTCCTTCTATTGAACCCTTATTGGACATGCAACATCTCTTTGAATCACTATTTGTCTATAAGCGATGTAGTCTTCTCCTACATGAAGTCATTTTCCTGCATATTTTAGGAGATAAGATTCCAACTGCAGTTTTTAAGCAGCAAAAATTCCAAATTGATCCCTTTGGAACAAACGTGTCTATAATAATGGACATCTCAAATTTTCAGTATGGGAGTGAATTGTGGGGAATTGCTGTATGCATGGTGGTAAAAAGCAAGAAGGCATTATATTACTGCTCAAGATCCAATTTTTCTTGGAGCTTCAGAGCTGTTGATGAAGATGAAAGCCTTGAGGAACCACAAAAGCATGTATTTTATGTTGGAAAAGCATATTCAATCCCTCATCTTTATATAGCATTTTTCCCTTTGATCAATACTCACAAGTTTTGGGGGCATCTAAGAGGTGAATCCCACCAACTTGAATTGCAAATTAAGGTTGAAAAGGAGTTTAGCATCAAGGATTGTGGTTGGCGTCTCATGTGCAACAGAGATTTTGATGGGAGCAATGCAAGCACTGCTACTCGTCCTCTTCACAATAACAACTCGCAAGCGATAATACTGTTGTGA 3195 0.3797 MALISYHVFLSFRGEDTRTSFTDHLYAALQRKGIVTFRDDQELERGRVISEKLMKAIDESLFAIVILSQDYAFSSWCLDELQKIVESKQNLTIFPVFYGVDPSDVRQQKGIIREAFEKHEGKFPDCKVRRWRRALTQVANLAGWDAKNKHEAGIVEHIANAIWTKLRVKLPPNFAHLVGLESKVDTLVSLMKIELNHKCLIGIWGMGGIGKTTLARVVYEAIGDKFETSCFLANIRKDSERKGLVYLQKKFLSALLHQGTNIKINDSYDGVEAIRSFLCNKKVLIVLDDVSHISQLENLVGDKDWFGDGSRILVTTRDIHLLTAHDQFEKYEMKMLGRGASLNLLCKHAFKTDYPQQGYWELSKKVVDYAGGLPLALQVLGSFLCKRSIAEWRDTLNKLKRNLHKDIFKTLRISYDGLDDEEYKTIFLDIACFFNWEKKVEVTKILENCGLHATIGIPVLIEKSLLSTYISFNGQEYVYMHDLLQEIGKNIVMQESPSDAGRRSRLWTWEQIDQAFRGNAGSKNVQSIVLNLKQAYEANWQPNCFSKMGNLRLLYLSNVNLLHGLNSLPTTLKVVIWEKYPLEALPRNIDQLYQLVELTLHRSRIRKLWNGRPFLGMLKFMDLSFSKELIETPDFKGVPNLESLFLEHCINLVKVHESLGQLKKLVKLSLRGCQNLTTLPRKLELNSLQDFSLYGCSKLQKLSEFGENMKCLSIFDLSGTNIKKVPSSIVHLSNLKELYLQGCNRRAWNSWTFFGYFGHLIGRFLGNPVVSKGLKLPNSFTGLSSLRKLDLSFSNLYDGAIPNDLSGLSSLMDFNLRGNNFISLPVGCISNLLKLEQFDLSNCVDLQSIPQLPPNLLRVYVGCCPSIEPLLDMQHLFESLFVYKRCSLLLHEVIFLHILGDKIPTAVFKQQKFQIDPFGTNVSIIMDISNFQYGSELWGIAVCMVVKSKKALYYCSRSNFSWSFRAVDEDESLEEPQKHVFYVGKAYSIPHLYIAFFPLINTHKFWGHLRGESHQLELQIKVEKEFSIKDCGWRLMCNRDFDGSNASTATRPLHNNNSQAIILL 1064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1810 1064 Gene3D Ribonuclease Inhibitor 709 881 IPR032675 -
Alju08g1810 1064 SMART till_3 5 141 IPR000157 GO:0007165
Alju08g1810 1064 ProSiteProfiles TIR domain profile. 4 170 IPR000157 GO:0007165
Alju08g1810 1064 SUPERFAMILY L domain-like 530 869 - -
Alju08g1810 1064 Gene3D - 336 419 IPR042197 -
Alju08g1810 1064 Gene3D - 167 331 IPR027417 -
Alju08g1810 1064 Gene3D Ribonuclease Inhibitor 522 708 IPR032675 -
Alju08g1810 1064 SUPERFAMILY "Winged helix" DNA-binding domain 406 515 IPR036390 -
Alju08g1810 1064 Pfam NB-ARC domain 190 412 IPR002182 GO:0043531
Alju08g1810 1064 Gene3D - 4 166 IPR035897 -
Alju08g1810 1064 PRINTS Disease resistance protein signature 200 215 - -
Alju08g1810 1064 PRINTS Disease resistance protein signature 277 291 - -
Alju08g1810 1064 PRINTS Disease resistance protein signature 660 676 - -
Alju08g1810 1064 PRINTS Disease resistance protein signature 370 384 - -
Alju08g1810 1064 FunFam Disease resistance protein (TIR-NBS-LRR class) 3 168 - -
Alju08g1810 1064 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 144 IPR035897 -
Alju08g1810 1064 Pfam TIR domain 6 170 IPR000157 GO:0007165
Alju08g1810 1064 FunFam Disease resistance protein (TIR-NBS-LRR class) 338 419 - -
Alju08g1810 1064 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 704 IPR044974 GO:0006952
Alju08g1810 1064 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 166 430 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1810 Alju-ChrAlju08 15507170 15511403 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1810 6 811 WRKY Transcription Factor Family AT4G12020 31.923 8.87e-94 327