Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1800 ATGAGGAGAGTTAGAGGAGCTGCCGCTGTTAAACAGGCGGCGGCGATGACGGCGGCGGTTGAACTGAATGGATCCGGTTCAGGGGCGGTTTTAAGAGAGCCTAGGTACCGGGGCGTGAGGAAGAGACCTTGGGGTAGATTCGCCGCCGAGATCAGAGACCCTTTGAAGAAAGCTCGTGTCTGGCTAGGCACCTTTGACTCCGCCGAGGAAGCGGCTCGAGCCTACGACGCCGCGGCGATAGCCCTTCGTGGAACCAAGGCCAAGACCAATTTCCCTATCTCTCCTTCATTTTCGCCGTTCTGTCATCCCACCACCAACCCTAACGTCAACGACGACGTTTTGGATCACCGGTTGTACGCGAACAACGGTTTCCAGGAGCACCAGATTAACCCTCAGAGACCAGCCACCAGCAGCATGAGCAGCACGTCCTTCAGCGGCCCACGGCCACCGTCAACGACGGCCACGGCAGTAGTAAACCGGAGATATCCCCGGACGCCACTGGTCATGCCGGATGATTGCCACAGTGACTGCGATTCCTCCTCATCAGTGATCGACGGCGACGGAGACGTTGAGGTCGCCGATTTCACCTCATCGTCGTTCCGTCAACCGTTGCCTTTCGATCTCAACTTCCCACCGTTAGATGCCGCGAACATGGCGGCCGACGATCTTCAGTGCACCGCTCTCTGCCTCTGA 693 0.583 MRRVRGAAAVKQAAAMTAAVELNGSGSGAVLREPRYRGVRKRPWGRFAAEIRDPLKKARVWLGTFDSAEEAARAYDAAAIALRGTKAKTNFPISPSFSPFCHPTTNPNVNDDVLDHRLYANNGFQEHQINPQRPATSSMSSTSFSGPRPPSTTATAVVNRRYPRTPLVMPDDCHSDCDSSSSVIDGDGDVEVADFTSSSFRQPLPFDLNFPPLDAANMAADDLQCTALCL 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1800 230 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 23 187 - -
Alju08g1800 230 SUPERFAMILY DNA-binding domain 35 94 IPR016177 GO:0003677
Alju08g1800 230 SMART rav1_2 35 98 IPR001471 GO:0003700|GO:0006355
Alju08g1800 230 PRINTS Ethylene responsive element binding protein signature 36 47 IPR001471 GO:0003700|GO:0006355
Alju08g1800 230 PRINTS Ethylene responsive element binding protein signature 58 74 IPR001471 GO:0003700|GO:0006355
Alju08g1800 230 CDD AP2 34 94 IPR001471 GO:0003700|GO:0006355
Alju08g1800 230 MobiDBLite consensus disorder prediction 126 154 - -
Alju08g1800 230 Pfam AP2 domain 34 84 IPR001471 GO:0003700|GO:0006355
Alju08g1800 230 ProSiteProfiles AP2/ERF domain profile. 35 92 IPR001471 GO:0003700|GO:0006355
Alju08g1800 230 Gene3D AP2/ERF domain 35 94 IPR036955 GO:0003700|GO:0006355
Alju08g1800 230 FunFam Ethylene-responsive transcription factor 2 35 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1800 Alju-ChrAlju08 15363296 15363988 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1800 1 230 AP2-EREBP Transcription Factor Family AT3G20310 54.475 3.20e-52 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju08g1800 AP2 1.3e-15 CL0081