Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1798 ATGGCTAGCGAGGAGGAGAGACATCTGGAGACTCAACTAGAGCTTCAGTTGCAGGAACAGAGGGATTCACTCTCTGCTATCAATGAAGCTTTGGTCTCTGATCCGTCCAATCCCGAGCTTCTCGCGGTTCATGAGGAGCTTGTTCAGGCAATCAAGGATGCAGAAGAAGGGCTTCTTCACTTAAAGCGTACTCGATTATTGCATGAAGCAGATTCAGTACTGAATAGATCTAATCTTTCTGCTCAAAAGGAGATTGTTGAGCCACTTGATCCCATAGATGTTGAACCAGAACCTCTAGAGCAACAACATTATTCTGTTGGATCTAAATGTAGATTCCGTCACACTGATGGACGCTGGTACAATGGTCAAGTAATGCAGTTAAATAGTTCTTCAGCAAAAATTTCATTCCTTATGCCTATGTCTGAGAATATGCTGATGTGCAAGTTTTTTCTGCAACAACGATGTCGGTTTGGTTCTAACTGTCGTCTATCACATGGTATTGATGTTCCACTGTCTTCCCTCAGAAAATATGTTCCTACCACCTGGAAGCAGTCCCTGGTTGGTTCAAGTATATGGGCAGTCTCAGATGTTAATACTGGCATTTGGAAGGAAGCTGAACTTGAATCCTGGGATGAAGAACTTGGAGTTGGACAAGTAGTTTTCCGAGATGACGGAAGTTCTGTGAAGTTAGGAGCAGAAGCTATGGCATTGTCTGAATGCGCAGAAGTGAGCGATGAAGAGAGTGATTCCATCTCAGAACAGTCTGATTTTAGTGACTATGAAGGAGATGACCCACAATGTTTAGGCTTTCTGGAAAGGACTCACCTGCAGCGAGGTATCCAGACTGAAACTGCTGTATTTGCTAAGTGGGAGAATCACACCAGGGGTATAGCTTCCAAAATGATGGCTAATATGGGTTACCGTGAAGGTATGGGTTTAGGTGTTTCTGGTCAAGGAATGCTTAATCCCATCCCGGTGAAGGTCCTCCCACCAAAGCAATCCTTAGATCATGCTCTTGAATCTCATAAAGATAAAGGAGAAGAGAGCAAAGACAGTCGAGGTAAGAAACGAAGTAGAGGTGGTAAGAGAAAACGTGATAAGAAATTTGCAGAAGCAATTCGTGCAGCAAAAGAAGAGGAGGAACCAGTATCAGATGTCTTTGCACTAATAAATAATCAGCTGGCAATGCATGGTGAAGCTATAAATGGTGGATTGGGGAAGAAGCAGCAACATAAAGGTTCGGGGGATGGTAAAAAAGTTGATAGGCGGGCTTTGATTGCTTATGAGGATGAGATAAAGGACTTGAGGATTCGGGTTGAGAAGCTTGAAGAAATGGTGCATAGAAACAAGAAAGAGAAATTAGTTTATGAGGCTGCTATGAGAAAGTTAATTGAAACCCGCAAGGCTTTAGCAGAGGCTGAAGCAGCCCATGTCTCTGCCTCAAATTCAGTTGCTAACAAAGATAAAGAGAAGAGATGGCTCAAGTTTTAG 1491 0.4313 MASEEERHLETQLELQLQEQRDSLSAINEALVSDPSNPELLAVHEELVQAIKDAEEGLLHLKRTRLLHEADSVLNRSNLSAQKEIVEPLDPIDVEPEPLEQQHYSVGSKCRFRHTDGRWYNGQVMQLNSSSAKISFLMPMSENMLMCKFFLQQRCRFGSNCRLSHGIDVPLSSLRKYVPTTWKQSLVGSSIWAVSDVNTGIWKEAELESWDEELGVGQVVFRDDGSSVKLGAEAMALSECAEVSDEESDSISEQSDFSDYEGDDPQCLGFLERTHLQRGIQTETAVFAKWENHTRGIASKMMANMGYREGMGLGVSGQGMLNPIPVKVLPPKQSLDHALESHKDKGEESKDSRGKKRSRGGKRKRDKKFAEAIRAAKEEEEPVSDVFALINNQLAMHGEAINGGLGKKQQHKGSGDGKKVDRRALIAYEDEIKDLRIRVEKLEEMVHRNKKEKLVYEAAMRKLIETRKALAEAEAAHVSASNSVANKDKEKRWLKF 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1798 496 MobiDBLite consensus disorder prediction 475 496 - -
Alju08g1798 496 Pfam CCCH-type zinc finger 146 166 IPR041367 -
Alju08g1798 496 Coils Coil 1 21 - -
Alju08g1798 496 SUPERFAMILY CCCH zinc finger 142 166 IPR036855 GO:0046872
Alju08g1798 496 ProSiteProfiles G-patch domain profile. 294 340 IPR000467 GO:0003676
Alju08g1798 496 SMART G-patch_5 292 338 IPR000467 GO:0003676
Alju08g1798 496 SMART c3hfinal6 141 167 IPR000571 GO:0046872
Alju08g1798 496 Coils Coil 425 452 - -
Alju08g1798 496 Gene3D - 106 178 - -
Alju08g1798 496 ProSiteProfiles Zinc finger C3H1-type profile. 141 168 IPR000571 GO:0046872
Alju08g1798 496 MobiDBLite consensus disorder prediction 338 370 - -
Alju08g1798 496 MobiDBLite consensus disorder prediction 338 355 - -
Alju08g1798 496 Pfam G-patch domain 294 336 IPR000467 GO:0003676
Alju08g1798 496 Coils Coil 456 476 - -
Alju08g1798 496 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 22 1 496 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Alju08g1798 G-patch 2.6e-12 CL0449