Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1744 ATGGTTTTAGGCTCCATCAAGAGATATATTAAGGGCATGTTTGGGTCAAGCTTTCGGTTTCCTTTTACGATGCCGATTGTGGAGCCTGACGGATCGGGAGACACTGAAGCGTTCGTCGAAGTCGACCCGACCAGAAGGTACGGGCGCTACCCTGAGCTGTTAGGTTCCGGTGCCGTGAAGAGAGTTTACAGAGCATTTGATCAAGAGGAAGGAATAGAAGTGGCGTGGAACCAGGTGAAACTGAGGAACTTCAGCGACAATCCGGCCATGTTGGAGCGGCTTTACTCCGAAGTGAGATTGCTGAGAAATCTCGCTAATAAGAACATCATATCGCTCTACCATTTCTGGACGGACGGCGAACGGAGCACTCTGAACTTCATCACTGAGGTCTGTTCCAGCGGGGATCTGAGGGAGTACCGGAAAAAGCACAGGCATGTGTCGATGAAGGCGCTGAAGAAGTGGTCTAAACAGATTCTGAAAGGATTGAACTATATGCATACTCACGAGCCCTGCATCATCCACAGAGATCTCAATTGCAGTAATATTTTCGTCAATGGGAATACTGGCCAGGTCAAGATTGGTGACTTGGGGTTGGCAGCAATAGTGGGGAAGAACCACTCTGCACATTCAATTCTGGGGACGCCGGAATTCATGGCGCCAGAGTTATACGACGAGGACTACACGGAGCTGGTGGATATATACTCATTTGGGATGTGTGTGTTGGAGATGGTGACCACAGAGATTCCTTACAGTGAGTGTGGCAATGTGGCCAGGATATACAAAAAAGTTTCAGCTGGGGTGAGACCTGAGGCACTGAACAAGATCAAAGATGAAGAGGTTAAGGCATTCATTGAGAGGTGCCTTGCTCAGCCAAGGGCAAGGCCTTCTGCTGCTCAGCTTCTCAGAGATCCTTTCTTTGATGGCATTGTTGATGATGACGAAAATGATCATTTTATTTCCTAA 963 0.4829 MVLGSIKRYIKGMFGSSFRFPFTMPIVEPDGSGDTEAFVEVDPTRRYGRYPELLGSGAVKRVYRAFDQEEGIEVAWNQVKLRNFSDNPAMLERLYSEVRLLRNLANKNIISLYHFWTDGERSTLNFITEVCSSGDLREYRKKHRHVSMKALKKWSKQILKGLNYMHTHEPCIIHRDLNCSNIFVNGNTGQVKIGDLGLAAIVGKNHSAHSILGTPEFMAPELYDEDYTELVDIYSFGMCVLEMVTTEIPYSECGNVARIYKKVSAGVRPEALNKIKDEEVKAFIERCLAQPRARPSAAQLLRDPFFDGIVDDDENDHFIS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1744 320 SUPERFAMILY Protein kinase-like (PK-like) 43 312 IPR011009 -
Alju08g1744 320 FunFam Probable serine/threonine-protein kinase WNK1 33 129 - -
Alju08g1744 320 Gene3D Transferase(Phosphotransferase) domain 1 131 310 - -
Alju08g1744 320 Pfam Protein kinase domain 52 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g1744 320 Gene3D Phosphorylase Kinase; domain 1 33 129 - -
Alju08g1744 320 ProSiteProfiles Protein kinase domain profile. 48 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g1744 320 FunFam probable serine/threonine-protein kinase WNK9 131 313 - -
Alju08g1744 320 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 35 307 - -
Alju08g1744 320 CDD STKc_WNK 46 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1744 Alju-ChrAlju08 14837748 14843093 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1744 28 310 MAP Kinase Kinase Kinase AT5G55560 80.212 4.01e-177 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Alju08g1744 Pkinase 6.5e-53 CL0016